Histogram1D.cpp

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// ************************************************************************** //
//
//  BornAgain: simulate and fit scattering at grazing incidence
//
//! @file      Device/Histo/Histogram1D.cpp
//! @brief     Implements class Histogram1D.
//!
//! @homepage  http://www.bornagainproject.org
//! @license   GNU General Public License v3 or higher (see COPYING)
//! @copyright Forschungszentrum Jülich GmbH 2018
//! @authors   Scientific Computing Group at MLZ (see CITATION, AUTHORS)
//
// ************************************************************************** //
 
#include "Device/Histo/Histogram1D.h"
#include "Base/Axis/VariableBinAxis.h"
#include "Device/Intensity/ArrayUtils.h"
#include <memory>
 
Histogram1D::Histogram1D(int nbinsx, double xlow, double xup)
{
    m_data.addAxis(FixedBinAxis("x-axis", nbinsx, xlow, xup));
}
 
Histogram1D::Histogram1D(int nbinsx, const std::vector<double>& xbins)
{
    m_data.addAxis(VariableBinAxis("x-axis", nbinsx, xbins));
}
 
Histogram1D::Histogram1D(const IAxis& axis) : IHistogram(axis) {}
 
Histogram1D::Histogram1D(const OutputData<double>& data)
{
    init_from_data(data);
}
 
Histogram1D* Histogram1D::clone() const
{
    return new Histogram1D(*this);
}
 
int Histogram1D::fill(double x, double weight)
{
    const IAxis& axis = getXaxis();
    if (x < axis.getMin() || x >= axis.getMax())
        return -1;
    size_t index = axis.findClosestIndex(x);
    m_data[index].add(weight);
    return (int)index;
}
 
std::vector<double> Histogram1D::getBinCenters() const
{
    return getXaxis().getBinCenters();
}
 
std::vector<double> Histogram1D::getBinValues() const
{
    return IHistogram::getDataVector(IHistogram::DataType::INTEGRAL);
}
 
std::vector<double> Histogram1D::getBinErrors() const
{
    return IHistogram::getDataVector(IHistogram::DataType::STANDARD_ERROR);
}
 
#ifdef BORNAGAIN_PYTHON
 
PyObject* Histogram1D::getBinCentersNumpy() const
{
    return ArrayUtils::createNumpyArray(getBinCenters());
}
 
PyObject* Histogram1D::getBinValuesNumpy() const
{
    return ArrayUtils::createNumpyArray(getBinValues());
}
 
PyObject* Histogram1D::getBinErrorsNumpy() const
{
    return ArrayUtils::createNumpyArray(getBinErrors());
}
 
#endif // BORNAGAIN_PYTHON
 
Histogram1D* Histogram1D::crop(double xmin, double xmax)
{
    const std::unique_ptr<IAxis> xaxis(getXaxis().createClippedAxis(xmin, xmax));
    Histogram1D* result = new Histogram1D(*xaxis);
    OutputData<CumulativeValue>::const_iterator it_origin = m_data.begin();
    OutputData<CumulativeValue>::iterator it_result = result->m_data.begin();
    while (it_origin != m_data.end()) {
        double x = m_data.getAxisValue(it_origin.getIndex(), 0);
        if (result->getXaxis().contains(x)) {
            *it_result = *it_origin;
            ++it_result;
        }
        ++it_origin;
    }
    return result;
}