BornAgain  1.19.79
Open-source research software to simulate and fit neutron and x-ray reflectometry and grazing-incidence small-angle scattering
Box Class Reference

Description

A rectangular prism (parallelepiped).

Definition at line 23 of file Box.h.

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Public Member Functions

 Box (double length, double width, double height)
 
 Box (std::vector< double > P)
 
double bottomZ (const IRotation *rotation) const override
 
virtual bool canSliceAnalytically (const IRotation *rot) const
 Default implementation only allows rotations along z-axis. More...
 
void checkNodeArgs () const
 Raises exception if a parameter value is invalid. More...
 
std::string className () const final
 Returns the class name, to be hard-coded in each leaf class that inherits from INode. More...
 
Boxclone () const override
 Returns a clone of this ISampleNode object. More...
 
std::vector< const Material * > containedMaterials () const
 Returns set of unique materials contained in this ISampleNode. More...
 
complex_t formfactor_at_bottom (C3 q) const override
 
virtual SpinMatrix formfactor_pol (C3 q) const
 Returns scattering amplitude for complex scattering wavevector q=k_i-k_f in case of matrix interactions. Default implementation calls formfactor_at_bottom(q) and multiplies with the unit matrix. More...
 
double height () const override
 
bool isMagnetic () const
 Returns true if there is any magnetic material in this ISampleNode. More...
 
double length () const
 
virtual const Materialmaterial () const
 Returns nullptr, unless overwritten to return a specific material. More...
 
virtual std::vector< const INode * > nodeChildren () const
 Returns all children. More...
 
std::vector< const INode * > nodeOffspring () const
 Returns all descendants. More...
 
std::vector< ParaMetaparDefs () const final
 Returns the parameter definitions, to be hard-coded in each leaf class. More...
 
virtual std::string pythonConstructor () const
 Creates the Python constructor of this class (or derived classes) More...
 
double radialExtension () const override
 Returns the (approximate in some cases) radial size of the particle of this form factor's shape. This is used for SSCA calculations. More...
 
std::string shapeName () const
 
virtual complex_t theFF (const WavevectorInfo &wavevectors) const
 
virtual SpinMatrix thePolFF (const WavevectorInfo &wavevectors) const
 
double topZ (const IRotation *rotation) const override
 
virtual void transferToCPP ()
 Used for Python overriding of clone (see swig/tweaks.py) More...
 
double volume () const override
 
double width () const
 

Protected Member Functions

void setPrism (bool symmetry_Ci, const std::vector< R3 > &vertices)
 

Protected Attributes

std::vector< double > m_P
 
std::unique_ptr< IShape3Dm_shape3D
 IShape3D object, used to retrieve vertices (which may be approximate in the case of round shapes). For soft particles, this will be a hard mean shape. More...
 

Private Attributes

const double & m_height
 
const double & m_length
 
std::vector< R3 > m_vertices
 
const double & m_width
 
std::unique_ptr< ff::Prism > pimpl
 

Constructor & Destructor Documentation

◆ Box() [1/2]

Box::Box ( double  length,
double  width,
double  height 
)

Definition at line 31 of file Box.cpp.

32  : Box(std::vector<double>{length, width, height})
33 {
34 }
double width() const
Definition: Box.h:40
Box(double length, double width, double height)
Definition: Box.cpp:31
double length() const
Definition: Box.h:39
double height() const override
Definition: Box.h:41

References height(), length(), and width().

Referenced by clone().

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◆ Box() [2/2]

Box::Box ( std::vector< double >  P)

Definition at line 18 of file Box.cpp.

19  : IFormFactorPrism(P)
20  , m_length(m_P[0])
21  , m_width(m_P[1])
22  , m_height(m_P[2])
23 {
24  checkNodeArgs();
25  double a = m_length / 2;
26  double b = m_width / 2;
27  std::vector<R3> V{{a, b, 0.}, {-a, b, 0.}, {-a, -b, 0.}, {a, -b, 0}};
28  setPrism(true, V);
29 }
const double & m_length
Definition: Box.h:48
const double & m_height
Definition: Box.h:50
const double & m_width
Definition: Box.h:49
IFormFactorPrism(const std::vector< double > &PValues)
void setPrism(bool symmetry_Ci, const std::vector< R3 > &vertices)
void checkNodeArgs() const
Raises exception if a parameter value is invalid.
Definition: INode.cpp:27
std::vector< double > m_P
Definition: INode.h:63

References INode::checkNodeArgs(), m_length, m_width, and IFormFactorPrism::setPrism().

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Member Function Documentation

◆ bottomZ()

double IFormFactorPrism::bottomZ ( const IRotation rotation) const
overridevirtualinherited

Reimplemented from IFormFactor.

Definition at line 37 of file IFormFactorPrism.cpp.

38 {
39  return PolyhedralUtil::BottomZ(m_vertices, rotation);
40 }
std::vector< R3 > m_vertices
double BottomZ(const std::vector< R3 > &vertices, const IRotation *rotation)
Calculates the z-coordinate of the lowest vertex after rotation.

References PolyhedralUtil::BottomZ(), and IFormFactorPrism::m_vertices.

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◆ canSliceAnalytically()

bool IFormFactor::canSliceAnalytically ( const IRotation rot) const
virtualinherited

Default implementation only allows rotations along z-axis.

Reimplemented in Sphere.

Definition at line 64 of file IFormFactor.cpp.

65 {
66  return !rotation || rotation->zInvariant();
67 }

References IRotation::zInvariant().

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◆ checkNodeArgs()

void INode::checkNodeArgs ( ) const
inherited

Raises exception if a parameter value is invalid.

Definition at line 27 of file INode.cpp.

28 {
29  size_t nP = m_P.size();
30  if (parDefs().size() != nP) {
31  std::cerr << "BUG in class " << className() << std::endl;
32  std::cerr << "#m_P = " << nP << std::endl;
33  std::cerr << "#PDf = " << parDefs().size() << std::endl;
34  for (const ParaMeta& pm : parDefs())
35  std::cerr << " PDf: " << pm.name << std::endl;
36  ASSERT(0);
37  }
38  ASSERT(parDefs().size() == nP);
39  for (size_t i = 0; i < nP; ++i) {
40  const ParaMeta pm = parDefs()[i];
41 
43  if (pm.vMin == -INF) {
44  ASSERT(pm.vMax == +INF);
45  // nothing to do
46  } else if (pm.vMax == +INF) {
47  ASSERT(pm.vMin == 0);
48  limits = RealLimits::nonnegative();
49  } else {
50  limits = RealLimits::limited(pm.vMin, pm.vMax);
51  }
52  limits.check(pm.name, m_P[i]);
53  }
54 }
#define ASSERT(condition)
Definition: Assert.h:45
const double INF
Definition: INode.h:26
virtual std::vector< ParaMeta > parDefs() const
Returns the parameter definitions, to be hard-coded in each leaf class.
Definition: INode.h:51
virtual std::string className() const =0
Returns the class name, to be hard-coded in each leaf class that inherits from INode.
Limits for a real fit parameter.
Definition: RealLimits.h:24
static RealLimits limitless()
Creates an object without bounds (default)
Definition: RealLimits.cpp:139
void check(const std::string &name, double value) const
Throws if value is outside limits. Parameter 'name' is for exception message.
Definition: RealLimits.cpp:170
static RealLimits nonnegative()
Creates an object which can have only positive values with 0. included.
Definition: RealLimits.cpp:124
static RealLimits limited(double left_bound_value, double right_bound_value)
Creates an object bounded from the left and right.
Definition: RealLimits.cpp:134
Metadata of one model parameter.
Definition: INode.h:29
double vMin
Definition: INode.h:33
double vMax
Definition: INode.h:34
std::string name
Definition: INode.h:30

References ASSERT, RealLimits::check(), INode::className(), INF, RealLimits::limited(), RealLimits::limitless(), INode::m_P, ParaMeta::name, RealLimits::nonnegative(), INode::parDefs(), ParaMeta::vMax, and ParaMeta::vMin.

Referenced by BarGauss::BarGauss(), BarLorentz::BarLorentz(), Bipyramid4::Bipyramid4(), Box(), CantellatedCube::CantellatedCube(), Cone::Cone(), ConstantBackground::ConstantBackground(), CosineRippleBox::CosineRippleBox(), CosineRippleGauss::CosineRippleGauss(), CosineRippleLorentz::CosineRippleLorentz(), Cylinder::Cylinder(), DistributionCosine::DistributionCosine(), DistributionGate::DistributionGate(), DistributionGaussian::DistributionGaussian(), DistributionLogNormal::DistributionLogNormal(), DistributionLorentz::DistributionLorentz(), DistributionTrapezoid::DistributionTrapezoid(), Dodecahedron::Dodecahedron(), EllipsoidalCylinder::EllipsoidalCylinder(), FootprintGauss::FootprintGauss(), FootprintSquare::FootprintSquare(), FuzzySphere::FuzzySphere(), GaussSphere::GaussSphere(), HemiEllipsoid::HemiEllipsoid(), HollowSphere::HollowSphere(), HorizontalCylinder::HorizontalCylinder(), Icosahedron::Icosahedron(), LongBoxGauss::LongBoxGauss(), LongBoxLorentz::LongBoxLorentz(), PlatonicOctahedron::PlatonicOctahedron(), PlatonicTetrahedron::PlatonicTetrahedron(), Prism3::Prism3(), Prism6::Prism6(), Profile1DCauchy::Profile1DCauchy(), Profile1DCosine::Profile1DCosine(), Profile1DGate::Profile1DGate(), Profile1DGauss::Profile1DGauss(), Profile1DTriangle::Profile1DTriangle(), Profile1DVoigt::Profile1DVoigt(), Profile2DCauchy::Profile2DCauchy(), Profile2DCone::Profile2DCone(), Profile2DGate::Profile2DGate(), Profile2DGauss::Profile2DGauss(), Profile2DVoigt::Profile2DVoigt(), Pyramid2::Pyramid2(), Pyramid3::Pyramid3(), Pyramid4::Pyramid4(), Pyramid6::Pyramid6(), RotationEuler::RotationEuler(), RotationX::RotationX(), RotationY::RotationY(), RotationZ::RotationZ(), SawtoothRippleBox::SawtoothRippleBox(), SawtoothRippleGauss::SawtoothRippleGauss(), SawtoothRippleLorentz::SawtoothRippleLorentz(), Sphere::Sphere(), Spheroid::Spheroid(), TruncatedCube::TruncatedCube(), TruncatedSphere::TruncatedSphere(), and TruncatedSpheroid::TruncatedSpheroid().

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◆ className()

std::string Box::className ( ) const
inlinefinalvirtual

Returns the class name, to be hard-coded in each leaf class that inherits from INode.

Implements INode.

Definition at line 30 of file Box.h.

30 { return "Box"; }

◆ clone()

Box* Box::clone ( ) const
inlineoverridevirtual

Returns a clone of this ISampleNode object.

Implements IFormFactor.

Definition at line 29 of file Box.h.

29 { return new Box(m_length, m_width, m_height); }

References Box(), m_height, m_length, and m_width.

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◆ containedMaterials()

std::vector< const Material * > ISampleNode::containedMaterials ( ) const
inherited

Returns set of unique materials contained in this ISampleNode.

Definition at line 25 of file ISampleNode.cpp.

26 {
27  std::vector<const Material*> result;
28  if (const Material* p_material = material())
29  result.push_back(p_material);
30  for (const auto* child : nodeChildren()) {
31  if (const auto* sample = dynamic_cast<const ISampleNode*>(child)) {
32  for (const Material* p_material : sample->containedMaterials())
33  result.push_back(p_material);
34  }
35  }
36  return result;
37 }
virtual std::vector< const INode * > nodeChildren() const
Returns all children.
Definition: INode.cpp:56
Abstract base class for sample components and properties related to scattering.
Definition: ISampleNode.h:27
virtual const Material * material() const
Returns nullptr, unless overwritten to return a specific material.
Definition: ISampleNode.h:36
A wrapper for underlying material implementation.
Definition: Material.h:35

References ISampleNode::material(), and INode::nodeChildren().

Referenced by SampleUtils::Multilayer::ContainsCompatibleMaterials(), SampleToPython::initLabels(), and ISampleNode::isMagnetic().

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◆ formfactor_at_bottom()

complex_t Box::formfactor_at_bottom ( C3  q) const
overridevirtual

Implements IFormFactor.

Definition at line 36 of file Box.cpp.

37 {
38  complex_t qzHdiv2 = m_height / 2 * q.z();
39  return m_length * m_width * m_height * Math::sinc(m_length / 2 * q.x())
40  * Math::sinc(m_width / 2 * q.y()) * Math::sinc(qzHdiv2) * exp_I(qzHdiv2);
41 }
double sinc(double x)
sinc function:
Definition: Functions.cpp:52

References m_height, m_length, m_width, and Math::sinc().

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◆ formfactor_pol()

SpinMatrix IFormFactor::formfactor_pol ( C3  q) const
virtualinherited

Returns scattering amplitude for complex scattering wavevector q=k_i-k_f in case of matrix interactions. Default implementation calls formfactor_at_bottom(q) and multiplies with the unit matrix.

Definition at line 78 of file IFormFactor.cpp.

79 {
81 }
virtual complex_t formfactor_at_bottom(C3 q) const =0
static SpinMatrix One()
Definition: SpinMatrix.cpp:36

References IFormFactor::formfactor_at_bottom(), and SpinMatrix::One().

Referenced by IFormFactor::thePolFF().

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◆ height()

double Box::height ( ) const
inlineoverridevirtual

Implements IFormFactorPrism.

Definition at line 41 of file Box.h.

41 { return m_height; }

References m_height.

Referenced by Box().

◆ isMagnetic()

bool ISampleNode::isMagnetic ( ) const
inherited

Returns true if there is any magnetic material in this ISampleNode.

Definition at line 39 of file ISampleNode.cpp.

40 {
41  const auto materials = containedMaterials();
42  return std::any_of(materials.cbegin(), materials.cend(),
43  [](const Material* mat) { return mat->isMagneticMaterial(); });
44 }
std::vector< const Material * > containedMaterials() const
Returns set of unique materials contained in this ISampleNode.
Definition: ISampleNode.cpp:25

References ISampleNode::containedMaterials().

Referenced by reSample::make().

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◆ length()

double Box::length ( ) const
inline

Definition at line 39 of file Box.h.

39 { return m_length; }

References m_length.

Referenced by Box().

◆ material()

virtual const Material* ISampleNode::material ( ) const
inlinevirtualinherited

Returns nullptr, unless overwritten to return a specific material.

Reimplemented in Particle, and Layer.

Definition at line 36 of file ISampleNode.h.

36 { return nullptr; }

Referenced by ISampleNode::containedMaterials().

◆ nodeChildren()

◆ nodeOffspring()

std::vector< const INode * > INode::nodeOffspring ( ) const
inherited

Returns all descendants.

Definition at line 61 of file INode.cpp.

62 {
63  std::vector<const INode*> result;
64  result.push_back(this);
65  for (const auto* child : nodeChildren()) {
66  for (const auto* p : child->nodeOffspring())
67  result.push_back(p);
68  }
69  return result;
70 }

References INode::nodeChildren().

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◆ parDefs()

std::vector<ParaMeta> Box::parDefs ( ) const
inlinefinalvirtual

Returns the parameter definitions, to be hard-coded in each leaf class.

Reimplemented from INode.

Definition at line 32 of file Box.h.

33  {
34  return {{"Length", "nm", "side length in x direction", 0, +INF, 0},
35  {"Width", "nm", "side length in y direction", 0, +INF, 0},
36  {"Height", "nm", "side length in z direction", 0, +INF, 0}};
37  }

References INF.

◆ pythonConstructor()

std::string IFormFactor::pythonConstructor ( ) const
virtualinherited

Creates the Python constructor of this class (or derived classes)

Definition at line 69 of file IFormFactor.cpp.

70 {
71  std::vector<std::pair<double, std::string>> arguments;
72  for (size_t i = 0; i < parDefs().size(); i++)
73  arguments.emplace_back(m_P[i], parDefs()[i].unit);
74 
75  return Py::Fmt::printFunction(className(), arguments);
76 }
std::string printFunction(const std::string &name, const std::vector< std::pair< double, std::string >> &arguments)
Print a function in the form "<name>(<arguments>)". arguments will be processed by printArguments(),...
Definition: PyFmt.cpp:168

References INode::className(), INode::m_P, INode::parDefs(), and Py::Fmt::printFunction().

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◆ radialExtension()

double Box::radialExtension ( ) const
inlineoverridevirtual

Returns the (approximate in some cases) radial size of the particle of this form factor's shape. This is used for SSCA calculations.

Implements IFormFactor.

Definition at line 44 of file Box.h.

44 { return m_length / 2.0; }

References m_length.

◆ setPrism()

void IFormFactorPrism::setPrism ( bool  symmetry_Ci,
const std::vector< R3 > &  vertices 
)
protectedinherited

Definition at line 26 of file IFormFactorPrism.cpp.

27 {
28  pimpl = std::make_unique<ff::Prism>(symmetry_Ci, height(), vertices);
29 
30  m_vertices.clear();
31  for (const R3& vertex : vertices) {
32  m_vertices.push_back(vertex);
33  m_vertices.push_back(vertex + R3{0, 0, height()});
34  }
35 }
virtual double height() const =0
std::unique_ptr< ff::Prism > pimpl

References IFormFactorPrism::height(), IFormFactorPrism::m_vertices, and IFormFactorPrism::pimpl.

Referenced by Box(), Prism3::Prism3(), and Prism6::Prism6().

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◆ shapeName()

std::string IFormFactor::shapeName ( ) const
inherited

Definition at line 33 of file IFormFactor.cpp.

34 {
35  if (className().substr(0, 10) == "FormFactor")
36  return className().substr(10);
37  return className();
38 }

References INode::className().

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◆ theFF()

complex_t IFormFactor::theFF ( const WavevectorInfo wavevectors) const
virtualinherited

Definition at line 40 of file IFormFactor.cpp.

41 {
42  return formfactor_at_bottom(wavevectors.getQ());
43 }
C3 getQ() const

References IFormFactor::formfactor_at_bottom(), and WavevectorInfo::getQ().

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◆ thePolFF()

SpinMatrix IFormFactor::thePolFF ( const WavevectorInfo wavevectors) const
virtualinherited

Definition at line 45 of file IFormFactor.cpp.

46 {
47  return formfactor_pol(wavevectors.getQ());
48 }
virtual SpinMatrix formfactor_pol(C3 q) const
Returns scattering amplitude for complex scattering wavevector q=k_i-k_f in case of matrix interactio...
Definition: IFormFactor.cpp:78

References IFormFactor::formfactor_pol(), and WavevectorInfo::getQ().

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◆ topZ()

double IFormFactorPrism::topZ ( const IRotation rotation) const
overridevirtualinherited

Reimplemented from IFormFactor.

Definition at line 42 of file IFormFactorPrism.cpp.

43 {
44  return PolyhedralUtil::TopZ(m_vertices, rotation);
45 }
double TopZ(const std::vector< R3 > &vertices, const IRotation *rotation)
Calculates the z-coordinate of the highest vertex after rotation.

References IFormFactorPrism::m_vertices, and PolyhedralUtil::TopZ().

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◆ transferToCPP()

virtual void ICloneable::transferToCPP ( )
inlinevirtualinherited

Used for Python overriding of clone (see swig/tweaks.py)

Definition at line 32 of file ICloneable.h.

◆ volume()

double Box::volume ( ) const
inlineoverridevirtual

Reimplemented from IFormFactor.

Definition at line 43 of file Box.h.

43 { return m_length * m_height * m_width; }

References m_height, m_length, and m_width.

◆ width()

double Box::width ( ) const
inline

Definition at line 40 of file Box.h.

40 { return m_width; }

References m_width.

Referenced by Box().

Member Data Documentation

◆ m_height

const double& Box::m_height
private

Definition at line 50 of file Box.h.

Referenced by clone(), formfactor_at_bottom(), height(), and volume().

◆ m_length

const double& Box::m_length
private

Definition at line 48 of file Box.h.

Referenced by Box(), clone(), formfactor_at_bottom(), length(), radialExtension(), and volume().

◆ m_P

◆ m_shape3D

◆ m_vertices

std::vector<R3> IFormFactorPrism::m_vertices
privateinherited

◆ m_width

const double& Box::m_width
private

Definition at line 49 of file Box.h.

Referenced by Box(), clone(), formfactor_at_bottom(), volume(), and width().

◆ pimpl

std::unique_ptr<ff::Prism> IFormFactorPrism::pimpl
privateinherited

The documentation for this class was generated from the following files: