FormFactorSawtoothRippleLorentz Class Reference

The form factor for a cosine ripple, with Lorentz form factor in elongation direction. More...

Inheritance diagram for FormFactorSawtoothRippleLorentz:

Collaboration diagram for FormFactorSawtoothRippleLorentz:

Public Member Functions
	FormFactorSawtoothRippleLorentz (const std::vector< double > P)
	FormFactorSawtoothRippleLorentz (double length, double width, double height, double asymmetry)
void	accept (INodeVisitor *visitor) const final
	Calls the INodeVisitor's visit method. More...
virtual double	bottomZ (const IRotation &rotation) const override
	Returns the z-coordinate of the lowest point in this shape after a given rotation. More...
FormFactorSawtoothRippleLorentz *	clone () const final
	Returns a clone of this ISampleNode object. More...
std::vector< const Material * >	containedMaterials () const
	Returns set of unique materials contained in this ISampleNode. More...
int	copyNumber (const INode *node) const
	Returns copyNumber of child, which takes into account existence of children with same name. More...
ParameterPool *	createParameterTree () const
	Creates new parameter pool, with all local parameters and those of its children. More...
IFormFactor *	createSlicedFormFactor (ZLimits limits, const IRotation &rot, kvector_t translation) const
	Creates a (possibly sliced) form factor with the given rotation and translation. More...
std::string	displayName () const
	Returns display name, composed from the name of node and it's copy number. More...
complex_t	evaluate (const WavevectorInfo &wavevectors) const override
	Returns scattering amplitude for complex wavevectors ki, kf. More...
complex_t	evaluate_for_q (cvector_t q) const final
	Returns scattering amplitude for complex scattering wavevector q=k_i-k_f. More...
Eigen::Matrix2cd	evaluatePol (const WavevectorInfo &wavevectors) const override
	Returns scattering amplitude for matrix interactions. More...
double	getAsymmetry () const
virtual std::vector< const INode * >	getChildren () const
	Returns a vector of children. More...
double	getHeight () const
double	getLength () const
const std::string &	getName () const
double	getWidth () const
bool	isMagnetic () const
	Returns true if there is any magnetic material in this ISampleNode. More...
virtual const Material *	material () const
	Returns nullptr, unless overwritten to return a specific material. More...
RealParameter *	parameter (const std::string &name) const
	Returns parameter with given 'name'. More...
ParameterPool *	parameterPool () const
	Returns pointer to the parameter pool. More...
std::string	parametersToString () const
	Returns multiline string representing available parameters. More...
INode *	parent ()
const INode *	parent () const
std::vector< const INode * >	progeny () const
	Returns a vector of all descendants. More...
double	radialExtension () const final
	Returns the (approximate in some cases) radial size of the particle of this form factor's shape. More...
void	registerChild (INode *node)
RealParameter &	registerParameter (const std::string &name, double *parpointer)
void	registerVector (const std::string &base_name, kvector_t *p_vec, const std::string &units="nm")
void	removeParameter (const std::string &name)
void	removeVector (const std::string &base_name)
void	setAmbientMaterial (const Material &) override
	Passes the material in which this particle is embedded. More...
void	setName (const std::string &name)
void	setParameterValue (const std::string &name, double value)
virtual void	setParent (const INode *newParent)
virtual void	setSpecularInfo (std::unique_ptr< const ILayerRTCoefficients >, std::unique_ptr< const ILayerRTCoefficients >)
	Sets reflection/transmission info. More...
void	setVectorValue (const std::string &base_name, kvector_t value)
virtual double	topZ (const IRotation &rotation) const override
	Returns the z-coordinate of the lowest point in this shape after a given rotation. More...
virtual void	transferToCPP ()
	Used for Python overriding of clone (see swig/tweaks.py) More...
virtual std::string	treeToString () const
	Returns multiline string representing tree structure below the node. More...
virtual double	volume () const
	Returns the total volume of the particle of this form factor's shape. More...

Static Public Member Functions
static std::string	XComponentName (const std::string &base_name)
static std::string	YComponentName (const std::string &base_name)
static std::string	ZComponentName (const std::string &base_name)

Protected Member Functions
bool	canSliceAnalytically (const IRotation &rot) const override
	Default implementation only allows rotations along z-axis. More...
virtual Eigen::Matrix2cd	evaluate_for_q_pol (cvector_t q) const
	Returns scattering amplitude for complex scattering wavevector q=k_i-k_f in case of matrix interactions. More...
virtual IFormFactor *	sliceFormFactor (ZLimits limits, const IRotation &rot, kvector_t translation) const
	Actually slices the form factor or throws an exception. More...

Static Protected Member Functions
static double	BottomZ (const std::vector< kvector_t > &vertices, const IRotation &rotation)
	Calculates the z-coordinate of the lowest vertex after rotation. More...
static SlicingEffects	computeSlicingEffects (ZLimits limits, const kvector_t &position, double height)
	Helper method for slicing. More...
static IFormFactor *	createTransformedFormFactor (const IFormFactor &formfactor, const IRotation &rot, kvector_t translation)
static double	TopZ (const std::vector< kvector_t > &vertices, const IRotation &rotation)
	Calculates the z-coordinate of the highest vertex after rotation. More...

Protected Attributes
const double &	m_asymmetry
const double &	m_height
const double &	m_length
const size_t	m_NP
std::vector< double >	m_P
std::unique_ptr< IShape3D >	m_shape3D
	IShape3D object, used to retrieve vertices (which may be approximate in the case of round shapes). More...
const double &	m_width

Private Member Functions
complex_t	factor_x (complex_t qx) const final
complex_t	factor_yz (complex_t qy, complex_t qz) const final
	Complex form factor. More...
virtual void	onChange () final
	Action to be taken in inherited class when a parameter has changed. More...

Private Attributes
std::string	m_name
const INode *	m_parent {nullptr}
std::unique_ptr< ParameterPool >	m_pool
	parameter pool (kind of pointer-to-implementation) More...

Detailed Description

The form factor for a cosine ripple, with Lorentz form factor in elongation direction.

Definition at line 48 of file FormFactorSawtoothRipple.h.

Constructor & Destructor Documentation

FormFactorSawtoothRippleLorentz() [1/2]

FormFactorSawtoothRippleLorentz::FormFactorSawtoothRippleLorentz

(

const std::vector< double >

P

)

Definition at line 82 of file FormFactorSawtoothRipple.cpp.

    : ISawtoothRipple({"SawtoothRippleLorentz", "class_tooltip", {}}, P)
{
}

Referenced by clone().

FormFactorSawtoothRippleLorentz() [2/2]

FormFactorSawtoothRippleLorentz::FormFactorSawtoothRippleLorentz	(	double	length,
		double	width,
		double	height,
		double	asymmetry
	)

Definition at line 87 of file FormFactorSawtoothRipple.cpp.

    : FormFactorSawtoothRippleLorentz(std::vector<double>{length, width, height, asymmetry})
{
}

Member Function Documentation

accept()

void FormFactorSawtoothRippleLorentz::accept ( INodeVisitor *  visitor ) const

finalvirtual

Calls the INodeVisitor's visit method.

Implements INode.

Definition at line 98 of file FormFactorSawtoothRipple.cpp.

{
    visitor->visit(this);
}

References INodeVisitor::visit().

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bottomZ()

double IBornFF::bottomZ ( const IRotation &  rotation ) const

overridevirtualinherited

Returns the z-coordinate of the lowest point in this shape after a given rotation.

Implements IFormFactor.

Reimplemented in IFormFactorPrism, IFormFactorPolyhedron, FormFactorFullSphere, and FormFactorDot.

Definition at line 40 of file IBornFF.cpp.

{
    if (!m_shape3D)
        return 0;
    return BottomZ(m_shape3D->vertices(), rotation);
}

References IBornFF::BottomZ(), and IBornFF::m_shape3D.

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BottomZ()

double IBornFF::BottomZ ( const std::vector< kvector_t > &  vertices, const IRotation &  rotation  )

staticprotectedinherited

Calculates the z-coordinate of the lowest vertex after rotation.

Definition at line 90 of file IBornFF.cpp.

{
    ASSERT(vertices.size());
    return algo::min_value(
        vertices.begin(), vertices.end(),
        [&](const kvector_t& vertex) -> double { return rotation.transformed(vertex).z(); });
}

References ASSERT, and algo::min_value().

Referenced by IFormFactorPolyhedron::bottomZ(), IFormFactorPrism::bottomZ(), and IBornFF::bottomZ().

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canSliceAnalytically()

bool IBornFF::canSliceAnalytically ( const IRotation &  rot ) const

overrideprotectedvirtualinherited

Default implementation only allows rotations along z-axis.

Reimplemented from IFormFactor.

Definition at line 54 of file IBornFF.cpp.

{
    if (rot.zInvariant())
        return true;
    return false;
}

References IRotation::zInvariant().

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clone()

FormFactorSawtoothRippleLorentz * FormFactorSawtoothRippleLorentz::clone ( ) const

finalvirtual

Returns a clone of this ISampleNode object.

Implements IBornFF.

Definition at line 93 of file FormFactorSawtoothRipple.cpp.

{
    return new FormFactorSawtoothRippleLorentz(m_length, m_width, m_height, m_asymmetry);
}

References FormFactorSawtoothRippleLorentz(), ISawtoothRipple::m_asymmetry, IProfileRipple::m_height, IProfileRipple::m_length, and IProfileRipple::m_width.

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computeSlicingEffects()

SlicingEffects IBornFF::computeSlicingEffects ( ZLimits  limits, const kvector_t &  position, double  height  )

staticprotectedinherited

Helper method for slicing.

Definition at line 66 of file IBornFF.cpp.

{
    kvector_t new_position(position);
    double z_bottom = position.z();
    double z_top = position.z() + height;
    OneSidedLimit lower_limit = limits.lowerLimit();
    OneSidedLimit upper_limit = limits.upperLimit();
    ASSERT(upper_limit.m_limitless || lower_limit.m_limitless
           || lower_limit.m_value <= upper_limit.m_value);
    double dz_top = upper_limit.m_limitless ? -1 : z_top - upper_limit.m_value;
    double dz_bottom = lower_limit.m_limitless ? -1 : lower_limit.m_value - z_bottom;
    ASSERT(dz_top >= 0 || dz_bottom >= 0);
    ASSERT(dz_bottom <= height);
    ASSERT(dz_top <= height);
    if (dz_bottom < 0)
        dz_bottom = 0;
    if (dz_top < 0)
        dz_top = 0;
    if (dz_bottom > 0)
        new_position.setZ(lower_limit.m_value);
    return {new_position, dz_bottom, dz_top};
}

References ASSERT, ZLimits::lowerLimit(), OneSidedLimit::m_limitless, OneSidedLimit::m_value, BasicVector3D< T >::setZ(), ZLimits::upperLimit(), and BasicVector3D< T >::z().

Referenced by FormFactorAnisoPyramid::sliceFormFactor(), FormFactorBox::sliceFormFactor(), FormFactorCone::sliceFormFactor(), FormFactorCone6::sliceFormFactor(), FormFactorCuboctahedron::sliceFormFactor(), FormFactorCylinder::sliceFormFactor(), FormFactorEllipsoidalCylinder::sliceFormFactor(), FormFactorFullSphere::sliceFormFactor(), FormFactorFullSpheroid::sliceFormFactor(), FormFactorLongBoxGauss::sliceFormFactor(), FormFactorLongBoxLorentz::sliceFormFactor(), FormFactorPrism3::sliceFormFactor(), FormFactorPrism6::sliceFormFactor(), FormFactorPyramid::sliceFormFactor(), FormFactorTetrahedron::sliceFormFactor(), FormFactorTruncatedSphere::sliceFormFactor(), and FormFactorTruncatedSpheroid::sliceFormFactor().

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containedMaterials()

std::vector< const Material * > ISampleNode::containedMaterials ( ) const

inherited

Returns set of unique materials contained in this ISampleNode.

Definition at line 26 of file ISampleNode.cpp.

{
    std::vector<const Material*> result;
    if (const Material* p_material = material())
        result.push_back(p_material);
    for (const auto* child : getChildren()) {
        if (const ISampleNode* sample = dynamic_cast<const ISampleNode*>(child)) {
            for (const Material* p_material : sample->containedMaterials())
                result.push_back(p_material);
        }
    }
    return result;
}

References INode::getChildren(), and ISampleNode::material().

Referenced by MultiLayerUtils::ContainsCompatibleMaterials(), SampleToPython::initLabels(), and ISampleNode::isMagnetic().

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copyNumber()

int INode::copyNumber ( const INode *  node ) const

inherited

Returns copyNumber of child, which takes into account existence of children with same name.

Definition at line 94 of file INode.cpp.

{
    if (node->parent() != this)
        return -1;
 
    int result(-1), count(0);
    for (auto child : getChildren()) {
 
        if (child == nullptr)
            throw std::runtime_error("INode::copyNumber() -> Error. Nullptr as child.");
 
        if (child == node)
            result = count;
 
        if (child->getName() == node->getName())
            ++count;
    }
 
    return count > 1 ? result : -1;
}

References INode::getChildren(), IParametricComponent::getName(), and INode::parent().

Referenced by INode::displayName().

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createParameterTree()

ParameterPool * INode::createParameterTree ( ) const

virtualinherited

Creates new parameter pool, with all local parameters and those of its children.

Reimplemented from IParametricComponent.

Definition at line 126 of file INode.cpp.

{
    std::unique_ptr<ParameterPool> result(new ParameterPool);
 
    for (const INode* child : progeny()) {
        const std::string path = NodeUtils::nodePath(child, parent()) + "/";
        child->parameterPool()->copyToExternalPool(path, result.get());
    }
 
    return result.release();
}

References NodeUtils::nodePath(), INode::parent(), and INode::progeny().

Referenced by ISimulation::runSimulation(), DepthProbeSimulation::validateParametrization(), OffSpecularSimulation::validateParametrization(), and SpecularSimulation::validateParametrization().

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createSlicedFormFactor()

IFormFactor * IFormFactor::createSlicedFormFactor ( ZLimits  limits, const IRotation &  rot, kvector_t  translation  ) const

inherited

Creates a (possibly sliced) form factor with the given rotation and translation.

Definition at line 58 of file IFormFactor.cpp.

{
    if (shapeIsContainedInLimits(*this, limits, rot, translation))
        return createTransformedFormFactor(*this, rot, translation);
    if (shapeOutsideLimits(*this, limits, rot, translation))
        return nullptr;
    if (canSliceAnalytically(rot))
        return sliceFormFactor(limits, rot, translation);
    throw std::runtime_error(getName()
                             + "::createSlicedFormFactor error: not supported for "
                               "the given rotation!");
}

References IFormFactor::canSliceAnalytically(), IFormFactor::createTransformedFormFactor(), IParametricComponent::getName(), and IFormFactor::sliceFormFactor().

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createTransformedFormFactor()

IFormFactor * IFormFactor::createTransformedFormFactor ( const IFormFactor &  formfactor, const IRotation &  rot, kvector_t  translation  )

staticprotectedinherited

Definition at line 99 of file IFormFactor.cpp.

{
    std::unique_ptr<IFormFactor> P_fftemp, P_result;
    if (!rot.isIdentity())
        P_fftemp = std::make_unique<FormFactorDecoratorRotation>(formfactor, rot);
    else
        P_fftemp.reset(formfactor.clone());
    if (translation != kvector_t())
        P_result = std::make_unique<FormFactorDecoratorPositionFactor>(*P_fftemp, translation);
    else
        std::swap(P_fftemp, P_result);
    return P_result.release();
}

References IFormFactor::clone(), IRotation::isIdentity(), and swap().

Referenced by IFormFactor::createSlicedFormFactor(), FormFactorAnisoPyramid::sliceFormFactor(), FormFactorBox::sliceFormFactor(), FormFactorCone::sliceFormFactor(), FormFactorCone6::sliceFormFactor(), FormFactorCuboctahedron::sliceFormFactor(), FormFactorCylinder::sliceFormFactor(), FormFactorEllipsoidalCylinder::sliceFormFactor(), FormFactorFullSphere::sliceFormFactor(), FormFactorFullSpheroid::sliceFormFactor(), FormFactorLongBoxGauss::sliceFormFactor(), FormFactorLongBoxLorentz::sliceFormFactor(), FormFactorPrism3::sliceFormFactor(), FormFactorPrism6::sliceFormFactor(), FormFactorPyramid::sliceFormFactor(), FormFactorTetrahedron::sliceFormFactor(), FormFactorTruncatedSphere::sliceFormFactor(), and FormFactorTruncatedSpheroid::sliceFormFactor().

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displayName()

std::string INode::displayName ( ) const

inherited

Returns display name, composed from the name of node and it's copy number.

Definition at line 115 of file INode.cpp.

{
    std::string result = getName();
    if (m_parent) {
        int index = m_parent->copyNumber(this);
        if (index >= 0)
            result = result + std::to_string(index);
    }
    return result;
}

References INode::copyNumber(), IParametricComponent::getName(), and INode::m_parent.

Referenced by NodeUtils::nodePath().

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evaluate()

complex_t IBornFF::evaluate ( const WavevectorInfo &  wavevectors ) const

overridevirtualinherited

Returns scattering amplitude for complex wavevectors ki, kf.

Implements IFormFactor.

Definition at line 30 of file IBornFF.cpp.

{
    return evaluate_for_q(wavevectors.getQ());
}

References IBornFF::evaluate_for_q(), and WavevectorInfo::getQ().

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evaluate_for_q()

complex_t IProfileRipple::evaluate_for_q ( cvector_t  q ) const

finalvirtualinherited

Returns scattering amplitude for complex scattering wavevector q=k_i-k_f.

This method is public only for convenience of plotting form factors in Python.

Implements IBornFF.

Definition at line 42 of file IProfileRipple.cpp.

{
    return factor_x(q.x()) * factor_yz(q.y(), q.z());
}

References IProfileRipple::factor_x(), IProfileRipple::factor_yz(), BasicVector3D< T >::x(), BasicVector3D< T >::y(), and BasicVector3D< T >::z().

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evaluate_for_q_pol()

Eigen::Matrix2cd IBornFF::evaluate_for_q_pol ( cvector_t  q ) const

protectedvirtualinherited

Returns scattering amplitude for complex scattering wavevector q=k_i-k_f in case of matrix interactions.

Default implementation calls evaluate_for_q(q) and multiplies with the unit matrix.

Definition at line 61 of file IBornFF.cpp.

{
    return evaluate_for_q(q) * Eigen::Matrix2cd::Identity();
}

References IBornFF::evaluate_for_q().

Referenced by IBornFF::evaluatePol().

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evaluatePol()

Eigen::Matrix2cd IBornFF::evaluatePol ( const WavevectorInfo &  wavevectors ) const

overridevirtualinherited

Returns scattering amplitude for matrix interactions.

Reimplemented from IFormFactor.

Definition at line 35 of file IBornFF.cpp.

{
    return evaluate_for_q_pol(wavevectors.getQ());
}

References IBornFF::evaluate_for_q_pol(), and WavevectorInfo::getQ().

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factor_x()

complex_t FormFactorSawtoothRippleLorentz::factor_x ( complex_t  qx ) const

finalprivatevirtual

Implements IProfileRipple.

Definition at line 103 of file FormFactorSawtoothRipple.cpp.

{
    return ripples::factor_x_Lorentz(qx, m_length);
}

References ripples::factor_x_Lorentz(), and IProfileRipple::m_length.

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factor_yz()

complex_t ISawtoothRipple::factor_yz ( complex_t  qy, complex_t  qz  ) const

finalprivatevirtualinherited

Complex form factor.

Implements IProfileRipple.

Definition at line 104 of file IProfileRipple.cpp.

{
    return ripples::profile_yz_triangular(qy, qz, m_width, m_height, m_asymmetry);
}

References ISawtoothRipple::m_asymmetry, IProfileRipple::m_height, IProfileRipple::m_width, and ripples::profile_yz_triangular().

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getAsymmetry()

double ISawtoothRipple::getAsymmetry ( ) const

inlineinherited

Definition at line 73 of file IProfileRipple.h.

{ return m_asymmetry; }

Referenced by GUIDomainSampleVisitor::visit().

getChildren()

std::vector< const INode * > INode::getChildren ( ) const

virtualinherited

Returns a vector of children.

Reimplemented in SampleProvider, IParticle, ParticleLayout, InterferenceFunctionFinite3DLattice, InterferenceFunctionFinite2DLattice, InterferenceFunction3DLattice, InterferenceFunction2DSuperLattice, InterferenceFunction2DParaCrystal, InterferenceFunction2DLattice, InterferenceFunction1DLattice, IDetector, Beam, ParticleDistribution, ParticleCoreShell, ParticleComposition, Particle, MesoCrystal, Crystal, MultiLayer, Layer, InterferenceFunctionRadialParaCrystal, LayerInterface, ConvolutionDetectorResolution, Instrument, and ISimulation.

Definition at line 63 of file INode.cpp.

{
    return {};
}

Referenced by node_progeny::AllDescendantsOfType(), node_progeny::ChildNodesOfType(), ISampleNode::containedMaterials(), INode::copyNumber(), INode::progeny(), and NodeUtils::progenyPlus().

getHeight()

double IProfileRipple::getHeight ( ) const

inlineinherited

Definition at line 28 of file IProfileRipple.h.

{ return m_height; }

References IProfileRipple::m_height.

Referenced by GUIDomainSampleVisitor::visit().

getLength()

double IProfileRipple::getLength ( ) const

inlineinherited

Definition at line 27 of file IProfileRipple.h.

{ return m_length; }

References IProfileRipple::m_length.

Referenced by GUIDomainSampleVisitor::visit().

getName()

const std::string& IParametricComponent::getName ( ) const

inlineinherited

Definition at line 70 of file IParametricComponent.h.

{ return m_name; }

References IParametricComponent::m_name.

Referenced by Beam::Beam(), ConvolutionDetectorResolution::ConvolutionDetectorResolution(), IDetector::IDetector(), Instrument::Instrument(), IParametricComponent::IParametricComponent(), SampleBuilderNode::SampleBuilderNode(), Layer::clone(), INode::copyNumber(), IParametricComponent::createParameterTree(), IFormFactor::createSlicedFormFactor(), SampleToPython::defineInterferenceFunctions(), INode::displayName(), Beam::operator=(), SampleBuilderNode::operator=(), GUIObjectBuilder::populateInstrumentModel(), PyImportAssistant::populateModels(), GUIDomainSampleVisitor::populateSampleModel(), IParametricComponent::registerParameter(), IFormFactor::sliceFormFactor(), and GUIDomainSampleVisitor::visit().

getWidth()

double IProfileRipple::getWidth ( ) const

inlineinherited

Definition at line 29 of file IProfileRipple.h.

{ return m_width; }

References IProfileRipple::m_width.

Referenced by GUIDomainSampleVisitor::visit().

isMagnetic()

bool ISampleNode::isMagnetic ( ) const

inherited

Returns true if there is any magnetic material in this ISampleNode.

Definition at line 40 of file ISampleNode.cpp.

{
    const auto materials = containedMaterials();
    return std::any_of(materials.cbegin(), materials.cend(),
                       [](const Material* mat) { return mat->isMagneticMaterial(); });
}

References ISampleNode::containedMaterials().

Referenced by ProcessedSample::initLayouts().

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material()

virtual const Material* ISampleNode::material ( ) const

inlinevirtualinherited

Returns nullptr, unless overwritten to return a specific material.

Reimplemented in Particle, and Layer.

Definition at line 37 of file ISampleNode.h.

{ return nullptr; }

Referenced by ISampleNode::containedMaterials(), FormFactorCoreShell::setAmbientMaterial(), FormFactorCrystal::setAmbientMaterial(), FormFactorWeighted::setAmbientMaterial(), FormFactorDecoratorMaterial::setAmbientMaterial(), IFormFactorDecorator::setAmbientMaterial(), and FormFactorDecoratorMaterial::setMaterial().

onChange()

void ISawtoothRipple::onChange ( )

finalprivatevirtualinherited

Action to be taken in inherited class when a parameter has changed.

Implements IProfileRipple.

Definition at line 109 of file IProfileRipple.cpp.

{
    m_shape3D = std::make_unique<RippleSawtooth>(m_length, m_width, m_height, m_asymmetry);
}

References ISawtoothRipple::m_asymmetry, IProfileRipple::m_height, IProfileRipple::m_length, IBornFF::m_shape3D, and IProfileRipple::m_width.

parameter()

RealParameter * IParametricComponent::parameter ( const std::string &  name ) const

inherited

Returns parameter with given 'name'.

Definition at line 86 of file IParametricComponent.cpp.

{
    return m_pool->parameter(name);
}

References IParametricComponent::m_pool, and RealSpace::Particles::name().

Referenced by DepthProbeSimulation::initialize(), SpecularSimulation::initialize(), Lattice3D::initialize(), IParticle::registerAbundance(), ParticleLayout::registerParticleDensity(), IParticle::registerPosition(), Layer::registerThickness(), Lattice2D::setRotationEnabled(), and DistributionLogNormal::setUnits().

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parameterPool()

ParameterPool* IParametricComponent::parameterPool ( ) const

inlineinherited

Returns pointer to the parameter pool.

Definition at line 39 of file IParametricComponent.h.

{ return m_pool.get(); } // has non-const usages!

References IParametricComponent::m_pool.

Referenced by INode::INode(), IParametricComponent::IParametricComponent(), pyfmt2::argumentList(), SampleBuilderNode::borrow_builder_parameters(), SampleBuilderNode::reset(), and IDistribution1D::setUnits().

parametersToString()

std::string IParametricComponent::parametersToString ( ) const

inherited

Returns multiline string representing available parameters.

Definition at line 43 of file IParametricComponent.cpp.

{
    std::ostringstream result;
    std::unique_ptr<ParameterPool> P_pool(createParameterTree());
    result << *P_pool << "\n";
    return result.str();
}

References IParametricComponent::createParameterTree().

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parent() [1/2]

INode * INode::parent ( )

inherited

Definition at line 89 of file INode.cpp.

{
    return const_cast<INode*>(m_parent);
}

References INode::m_parent.

parent() [2/2]

const INode * INode::parent ( ) const

inherited

Definition at line 84 of file INode.cpp.

{
    return m_parent;
}

References INode::m_parent.

Referenced by INode::copyNumber(), INode::createParameterTree(), ParticleDistribution::generateParticles(), NodeUtils::nodePath(), Lattice2D::onChange(), SampleProvider::setBuilder(), SampleProvider::setParent(), and SampleProvider::setSample().

progeny()

std::vector< const INode * > INode::progeny ( ) const

inherited

Returns a vector of all descendants.

Definition at line 68 of file INode.cpp.

{
    std::vector<const INode*> result;
    result.push_back(this);
    for (const auto* child : getChildren()) {
        for (const auto* p : child->progeny())
            result.push_back(p);
    }
    return result;
}

References INode::getChildren().

Referenced by INode::createParameterTree(), and ParticleDistribution::generateParticles().

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radialExtension()

double IProfileRipple::radialExtension ( ) const

finalvirtualinherited

Returns the (approximate in some cases) radial size of the particle of this form factor's shape.

This is used for SSCA calculations

Implements IFormFactor.

Definition at line 37 of file IProfileRipple.cpp.

{
    return (m_width + m_length) / 4.0;
}

References IProfileRipple::m_length, and IProfileRipple::m_width.

registerChild()

void INode::registerChild ( INode *  node )

inherited

Definition at line 57 of file INode.cpp.

{
    ASSERT(node);
    node->setParent(this);
}

References ASSERT, and INode::setParent().

Referenced by Beam::Beam(), Crystal::Crystal(), IDetector::IDetector(), Instrument::Instrument(), InterferenceFunction2DLattice::InterferenceFunction2DLattice(), InterferenceFunction2DParaCrystal::InterferenceFunction2DParaCrystal(), InterferenceFunction2DSuperLattice::InterferenceFunction2DSuperLattice(), InterferenceFunctionFinite2DLattice::InterferenceFunctionFinite2DLattice(), Particle::Particle(), ParticleDistribution::ParticleDistribution(), ParticleLayout::addAndRegisterAbstractParticle(), ParticleCoreShell::addAndRegisterCore(), MultiLayer::addAndRegisterInterface(), MultiLayer::addAndRegisterLayer(), ParticleCoreShell::addAndRegisterShell(), Layer::addLayout(), ParticleComposition::addParticlePointer(), ISimulation::initialize(), MesoCrystal::initialize(), Beam::operator=(), Instrument::operator=(), IParticle::rotate(), ParticleLayout::setAndRegisterInterferenceFunction(), ISimulation::setBackground(), InterferenceFunction1DLattice::setDecayFunction(), InterferenceFunction2DLattice::setDecayFunction(), Instrument::setDetector(), IDetector::setDetectorResolution(), Beam::setFootprintFactor(), Particle::setFormFactor(), InterferenceFunctionFinite3DLattice::setLattice(), InterferenceFunctionRadialParaCrystal::setProbabilityDistribution(), InterferenceFunction2DParaCrystal::setProbabilityDistributions(), ConvolutionDetectorResolution::setResolutionFunction(), IParticle::setRotation(), LayerInterface::setRoughness(), and InterferenceFunction2DSuperLattice::setSubstructureIFF().

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registerParameter()

RealParameter & IParametricComponent::registerParameter ( const std::string &  name, double *  parpointer  )

inherited

Definition at line 51 of file IParametricComponent.cpp.

{
    return m_pool->addParameter(
        new RealParameter(name, data, getName(), [&]() -> void { onChange(); }));
}

References IParametricComponent::getName(), IParametricComponent::m_pool, RealSpace::Particles::name(), and IParametricComponent::onChange().

Referenced by BasicLattice2D::BasicLattice2D(), Beam::Beam(), CylindersInBABuilder::CylindersInBABuilder(), DetectionProperties::DetectionProperties(), HexagonalLattice2D::HexagonalLattice2D(), IInterferenceFunction::IInterferenceFunction(), INode::INode(), InterferenceFunction1DLattice::InterferenceFunction1DLattice(), InterferenceFunction2DParaCrystal::InterferenceFunction2DParaCrystal(), InterferenceFunctionHardDisk::InterferenceFunctionHardDisk(), InterferenceFunctionRadialParaCrystal::InterferenceFunctionRadialParaCrystal(), InterferenceFunctionTwin::InterferenceFunctionTwin(), Lattice2D::Lattice2D(), LayerRoughness::LayerRoughness(), MultiLayer::MultiLayer(), ParticleDistribution::ParticleDistribution(), PlainMultiLayerBySLDBuilder::PlainMultiLayerBySLDBuilder(), ResolutionFunction2DGaussian::ResolutionFunction2DGaussian(), ResonatorBuilder::ResonatorBuilder(), SquareLattice2D::SquareLattice2D(), TriangularRippleBuilder::TriangularRippleBuilder(), IParticle::registerAbundance(), ParticleLayout::registerParticleDensity(), Layer::registerThickness(), IParametricComponent::registerVector(), ParticleLayout::registerWeight(), and Lattice2D::setRotationEnabled().

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registerVector()

void IParametricComponent::registerVector ( const std::string &  base_name, kvector_t *  p_vec, const std::string &  units = "nm"  )

inherited

Definition at line 57 of file IParametricComponent.cpp.

{
    registerParameter(XComponentName(base_name), &((*p_vec)[0])).setUnit(units);
    registerParameter(YComponentName(base_name), &((*p_vec)[1])).setUnit(units);
    registerParameter(ZComponentName(base_name), &((*p_vec)[2])).setUnit(units);
}

References ModelView::Utils::base_name(), IParametricComponent::registerParameter(), RealParameter::setUnit(), IParametricComponent::XComponentName(), IParametricComponent::YComponentName(), and IParametricComponent::ZComponentName().

Referenced by Beam::Beam(), DetectionProperties::DetectionProperties(), InterferenceFunctionTwin::InterferenceFunctionTwin(), MultiLayer::MultiLayer(), Lattice3D::initialize(), and IParticle::registerPosition().

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removeParameter()

void IParametricComponent::removeParameter ( const std::string &  name )

inherited

Definition at line 91 of file IParametricComponent.cpp.

{
    m_pool->removeParameter(name);
}

References IParametricComponent::m_pool, and RealSpace::Particles::name().

Referenced by IParticle::registerAbundance(), ParticleLayout::registerParticleDensity(), Layer::registerThickness(), IParametricComponent::removeVector(), and Lattice2D::setRotationEnabled().

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removeVector()

void IParametricComponent::removeVector ( const std::string &  base_name )

inherited

Definition at line 96 of file IParametricComponent.cpp.

{
    removeParameter(XComponentName(base_name));
    removeParameter(YComponentName(base_name));
    removeParameter(ZComponentName(base_name));
}

References ModelView::Utils::base_name(), IParametricComponent::removeParameter(), IParametricComponent::XComponentName(), IParametricComponent::YComponentName(), and IParametricComponent::ZComponentName().

Referenced by IParticle::registerPosition().

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setAmbientMaterial()

void IBornFF::setAmbientMaterial ( const Material &  )

inlineoverridevirtualinherited

Passes the material in which this particle is embedded.

Implements IFormFactor.

Definition at line 49 of file IBornFF.h.

{}

setName()

void IParametricComponent::setName ( const std::string &  name )

inlineinherited

Definition at line 69 of file IParametricComponent.h.

{ m_name = name; }

References IParametricComponent::m_name, and RealSpace::Particles::name().

Referenced by BasicLattice2D::BasicLattice2D(), Beam::Beam(), ConvolutionDetectorResolution::ConvolutionDetectorResolution(), Crystal::Crystal(), DetectionProperties::DetectionProperties(), DistributionHandler::DistributionHandler(), FormFactorCoreShell::FormFactorCoreShell(), FormFactorCrystal::FormFactorCrystal(), FormFactorDecoratorMaterial::FormFactorDecoratorMaterial(), FormFactorDecoratorPositionFactor::FormFactorDecoratorPositionFactor(), FormFactorDecoratorRotation::FormFactorDecoratorRotation(), FormFactorWeighted::FormFactorWeighted(), HexagonalLattice2D::HexagonalLattice2D(), IDetector::IDetector(), INode::INode(), Instrument::Instrument(), InterferenceFunction1DLattice::InterferenceFunction1DLattice(), InterferenceFunction2DLattice::InterferenceFunction2DLattice(), InterferenceFunction2DParaCrystal::InterferenceFunction2DParaCrystal(), InterferenceFunction2DSuperLattice::InterferenceFunction2DSuperLattice(), InterferenceFunction3DLattice::InterferenceFunction3DLattice(), InterferenceFunctionFinite2DLattice::InterferenceFunctionFinite2DLattice(), InterferenceFunctionFinite3DLattice::InterferenceFunctionFinite3DLattice(), InterferenceFunctionHardDisk::InterferenceFunctionHardDisk(), InterferenceFunctionNone::InterferenceFunctionNone(), InterferenceFunctionRadialParaCrystal::InterferenceFunctionRadialParaCrystal(), InterferenceFunctionTwin::InterferenceFunctionTwin(), ISampleBuilder::ISampleBuilder(), IsGISAXSDetector::IsGISAXSDetector(), Lattice3D::Lattice3D(), Layer::Layer(), LayerInterface::LayerInterface(), LayerRoughness::LayerRoughness(), MultiLayer::MultiLayer(), ParticleCoreShell::ParticleCoreShell(), ParticleDistribution::ParticleDistribution(), ParticleLayout::ParticleLayout(), RectangularDetector::RectangularDetector(), ResolutionFunction2DGaussian::ResolutionFunction2DGaussian(), SampleBuilderNode::SampleBuilderNode(), SphericalDetector::SphericalDetector(), SquareLattice2D::SquareLattice2D(), Layer::clone(), LayersWithAbsorptionBuilder::createSampleByIndex(), Basic2DParaCrystalBuilder::createSampleByIndex(), ParticleInVacuumBuilder::createSampleByIndex(), SimpleMagneticRotationBuilder::createSampleByIndex(), DepthProbeSimulation::initialize(), GISASSimulation::initialize(), OffSpecularSimulation::initialize(), SpecularSimulation::initialize(), SpecularDetector1D::initialize(), MesoCrystal::initialize(), Particle::initialize(), ParticleComposition::initialize(), Beam::operator=(), SampleBuilderNode::operator=(), SampleBuilderNode::reset(), and SampleBuilderNode::setSBN().

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setParameterValue()

void IParametricComponent::setParameterValue ( const std::string &  name, double  value  )

inherited

Definition at line 65 of file IParametricComponent.cpp.

{
    if (name.find('*') == std::string::npos && name.find('/') == std::string::npos) {
        m_pool->setParameterValue(name, value);
    } else {
        std::unique_ptr<ParameterPool> P_pool{createParameterTree()};
        if (name.find('*') != std::string::npos)
            P_pool->setMatchedParametersValue(name, value);
        else
            P_pool->setParameterValue(name, value);
    }
}

References IParametricComponent::createParameterTree(), IParametricComponent::m_pool, RealSpace::Particles::name(), and ParameterPool::setMatchedParametersValue().

Referenced by AsymRippleBuilder::buildSample(), and IParametricComponent::setVectorValue().

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setParent()

void INode::setParent ( const INode *  newParent )

virtualinherited

Reimplemented in SampleProvider.

Definition at line 79 of file INode.cpp.

{
    m_parent = newParent;
}

References INode::m_parent.

Referenced by INode::registerChild(), SampleProvider::setBuilder(), and SampleProvider::setParent().

setSpecularInfo()

void IFormFactor::setSpecularInfo ( std::unique_ptr< const ILayerRTCoefficients >  , std::unique_ptr< const ILayerRTCoefficients >    )

virtualinherited

Sets reflection/transmission info.

Definition at line 84 of file IFormFactor.cpp.

{
}

setVectorValue()

void IParametricComponent::setVectorValue ( const std::string &  base_name, kvector_t  value  )

inherited

Definition at line 78 of file IParametricComponent.cpp.

{
    setParameterValue(XComponentName(base_name), value.x());
    setParameterValue(YComponentName(base_name), value.y());
    setParameterValue(ZComponentName(base_name), value.z());
}

References ModelView::Utils::base_name(), IParametricComponent::setParameterValue(), BasicVector3D< T >::x(), IParametricComponent::XComponentName(), BasicVector3D< T >::y(), IParametricComponent::YComponentName(), BasicVector3D< T >::z(), and IParametricComponent::ZComponentName().

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sliceFormFactor()

IFormFactor * IFormFactor::sliceFormFactor ( ZLimits  limits, const IRotation &  rot, kvector_t  translation  ) const

protectedvirtualinherited

Actually slices the form factor or throws an exception.

Reimplemented in FormFactorTruncatedSpheroid, FormFactorTruncatedSphere, FormFactorTetrahedron, FormFactorPyramid, FormFactorPrism6, FormFactorPrism3, FormFactorLongBoxLorentz, FormFactorLongBoxGauss, FormFactorFullSpheroid, FormFactorFullSphere, FormFactorEllipsoidalCylinder, FormFactorCylinder, FormFactorCuboctahedron, FormFactorCone6, FormFactorCone, FormFactorBox, and FormFactorAnisoPyramid.

Definition at line 94 of file IFormFactor.cpp.

{
    throw std::runtime_error(getName() + "::sliceFormFactor error: not implemented!");
}

References IParametricComponent::getName().

Referenced by IFormFactor::createSlicedFormFactor().

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topZ()

double IBornFF::topZ ( const IRotation &  rotation ) const

overridevirtualinherited

Returns the z-coordinate of the lowest point in this shape after a given rotation.

Implements IFormFactor.

Reimplemented in IFormFactorPrism, IFormFactorPolyhedron, FormFactorFullSphere, and FormFactorDot.

Definition at line 47 of file IBornFF.cpp.

{
    if (!m_shape3D)
        return 0;
    return TopZ(m_shape3D->vertices(), rotation);
}

References IBornFF::m_shape3D, and IBornFF::TopZ().

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TopZ()

double IBornFF::TopZ ( const std::vector< kvector_t > &  vertices, const IRotation &  rotation  )

staticprotectedinherited

Calculates the z-coordinate of the highest vertex after rotation.

Definition at line 98 of file IBornFF.cpp.

{
    ASSERT(vertices.size());
    return algo::max_value(
        vertices.begin(), vertices.end(),
        [&](const kvector_t& vertex) -> double { return rotation.transformed(vertex).z(); });
}

References ASSERT, and algo::max_value().

Referenced by IFormFactorPolyhedron::topZ(), IFormFactorPrism::topZ(), and IBornFF::topZ().

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transferToCPP()

virtual void ICloneable::transferToCPP ( )

inlinevirtualinherited

Used for Python overriding of clone (see swig/tweaks.py)

Definition at line 34 of file ICloneable.h.

treeToString()

std::string INode::treeToString ( ) const

virtualinherited

Returns multiline string representing tree structure below the node.

Definition at line 52 of file INode.cpp.

{
    return NodeUtils::nodeToString(this);
}

References NodeUtils::nodeToString().

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volume()

double IFormFactor::volume ( ) const

virtualinherited

Returns the total volume of the particle of this form factor's shape.

Reimplemented in IFormFactorDecorator, FormFactorCrystal, IFormFactorPrism, IFormFactorPolyhedron, and FormFactorBox.

Definition at line 78 of file IFormFactor.cpp.

{
    auto zero_wavevectors = WavevectorInfo::GetZeroQ();
    return std::abs(evaluate(zero_wavevectors));
}

References IFormFactor::evaluate(), and WavevectorInfo::GetZeroQ().

Referenced by FormFactorCrystal::volume(), and IFormFactorDecorator::volume().

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XComponentName()

std::string IParametricComponent::XComponentName ( const std::string &  base_name )

staticinherited

Definition at line 103 of file IParametricComponent.cpp.

{
    return base_name + "X";
}

References ModelView::Utils::base_name().

Referenced by Lattice3D::initialize(), IParticle::registerPosition(), IParametricComponent::registerVector(), IParametricComponent::removeVector(), IParametricComponent::setVectorValue(), and VectorParameterTranslator::translate().

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YComponentName()

std::string IParametricComponent::YComponentName ( const std::string &  base_name )

staticinherited

Definition at line 108 of file IParametricComponent.cpp.

{
    return base_name + "Y";
}

References ModelView::Utils::base_name().

Referenced by IParametricComponent::registerVector(), IParametricComponent::removeVector(), IParametricComponent::setVectorValue(), and VectorParameterTranslator::translate().

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ZComponentName()

std::string IParametricComponent::ZComponentName ( const std::string &  base_name )

staticinherited

Definition at line 113 of file IParametricComponent.cpp.

{
    return base_name + "Z";
}

References ModelView::Utils::base_name().

Referenced by IParametricComponent::registerVector(), IParametricComponent::removeVector(), IParametricComponent::setVectorValue(), and VectorParameterTranslator::translate().

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Member Data Documentation

m_asymmetry

const double& ISawtoothRipple::m_asymmetry

protectedinherited

Definition at line 76 of file IProfileRipple.h.

Referenced by FormFactorSawtoothRippleBox::clone(), FormFactorSawtoothRippleGauss::clone(), clone(), ISawtoothRipple::factor_yz(), and ISawtoothRipple::onChange().

m_height

const double& IProfileRipple::m_height

protectedinherited

Definition at line 38 of file IProfileRipple.h.

Referenced by FormFactorBarGauss::clone(), FormFactorBarLorentz::clone(), FormFactorCosineRippleBox::clone(), FormFactorCosineRippleGauss::clone(), FormFactorCosineRippleLorentz::clone(), FormFactorSawtoothRippleBox::clone(), FormFactorSawtoothRippleGauss::clone(), clone(), IProfileRectangularRipple::factor_yz(), ICosineRipple::factor_yz(), ISawtoothRipple::factor_yz(), IProfileRipple::getHeight(), IProfileRectangularRipple::onChange(), ICosineRipple::onChange(), and ISawtoothRipple::onChange().

m_length

const double& IProfileRipple::m_length

protectedinherited

Definition at line 36 of file IProfileRipple.h.

Referenced by FormFactorBarGauss::clone(), FormFactorBarLorentz::clone(), FormFactorCosineRippleBox::clone(), FormFactorCosineRippleGauss::clone(), FormFactorCosineRippleLorentz::clone(), FormFactorSawtoothRippleBox::clone(), FormFactorSawtoothRippleGauss::clone(), clone(), FormFactorBarGauss::factor_x(), FormFactorBarLorentz::factor_x(), FormFactorCosineRippleBox::factor_x(), FormFactorCosineRippleGauss::factor_x(), FormFactorCosineRippleLorentz::factor_x(), FormFactorSawtoothRippleBox::factor_x(), FormFactorSawtoothRippleGauss::factor_x(), factor_x(), IProfileRipple::getLength(), IProfileRectangularRipple::onChange(), ICosineRipple::onChange(), ISawtoothRipple::onChange(), and IProfileRipple::radialExtension().

m_name

std::string IParametricComponent::m_name

privateinherited

Definition at line 73 of file IParametricComponent.h.

Referenced by IParametricComponent::getName(), and IParametricComponent::setName().

m_NP

const size_t INode::m_NP

protectedinherited

Definition at line 88 of file INode.h.

Referenced by INode::INode().

m_P

std::vector<double> INode::m_P

protectedinherited

Definition at line 89 of file INode.h.

Referenced by INode::INode(), and IFootprintFactor::setWidthRatio().

m_parent

const INode* INode::m_parent {nullptr}

privateinherited

Definition at line 83 of file INode.h.

Referenced by INode::displayName(), INode::parent(), and INode::setParent().

m_pool

std::unique_ptr<ParameterPool> IParametricComponent::m_pool

privateinherited

parameter pool (kind of pointer-to-implementation)

Definition at line 74 of file IParametricComponent.h.

Referenced by IParametricComponent::createParameterTree(), IParametricComponent::parameter(), IParametricComponent::parameterPool(), IParametricComponent::registerParameter(), IParametricComponent::removeParameter(), and IParametricComponent::setParameterValue().

m_shape3D

std::unique_ptr<IShape3D> IBornFF::m_shape3D

protectedinherited

IShape3D object, used to retrieve vertices (which may be approximate in the case of round shapes).

For soft particles, this will be a hard mean shape.

Definition at line 77 of file IBornFF.h.

Referenced by IBornFF::bottomZ(), FormFactorCone::onChange(), FormFactorCylinder::onChange(), FormFactorEllipsoidalCylinder::onChange(), FormFactorFullSpheroid::onChange(), FormFactorHemiEllipsoid::onChange(), FormFactorHollowSphere::onChange(), FormFactorLongBoxGauss::onChange(), FormFactorLongBoxLorentz::onChange(), FormFactorTruncatedSphere::onChange(), FormFactorTruncatedSpheroid::onChange(), IProfileRectangularRipple::onChange(), ICosineRipple::onChange(), ISawtoothRipple::onChange(), FormFactorSphereGaussianRadius::onChange(), FormFactorSphereLogNormalRadius::onChange(), and IBornFF::topZ().

m_width

const double& IProfileRipple::m_width

protectedinherited

Definition at line 37 of file IProfileRipple.h.

Referenced by FormFactorBarGauss::clone(), FormFactorBarLorentz::clone(), FormFactorCosineRippleBox::clone(), FormFactorCosineRippleGauss::clone(), FormFactorCosineRippleLorentz::clone(), FormFactorSawtoothRippleBox::clone(), FormFactorSawtoothRippleGauss::clone(), clone(), IProfileRectangularRipple::factor_yz(), ICosineRipple::factor_yz(), ISawtoothRipple::factor_yz(), IProfileRipple::getWidth(), IProfileRectangularRipple::onChange(), ICosineRipple::onChange(), ISawtoothRipple::onChange(), and IProfileRipple::radialExtension().

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The documentation for this class was generated from the following files:

• /home/www/ba/Sample/HardParticle/FormFactorSawtoothRipple.h
• /home/www/ba/Sample/HardParticle/FormFactorSawtoothRipple.cpp