InterferenceFunctionFinite2DLattice Class Reference

Interference function of a finite 2D lattice. More...

Inheritance diagram for InterferenceFunctionFinite2DLattice:

Collaboration diagram for InterferenceFunctionFinite2DLattice:

Public Member Functions
	InterferenceFunctionFinite2DLattice (const Lattice2D &lattice, unsigned N_1, unsigned N_2)
	Constructor of two-dimensional finite lattice interference function. More...
	~InterferenceFunctionFinite2DLattice () override
void	accept (INodeVisitor *visitor) const override
	Calls the INodeVisitor's visit method. More...
InterferenceFunctionFinite2DLattice *	clone () const override
	Returns a clone of this ISampleNode object. More...
std::vector< const Material * >	containedMaterials () const
	Returns set of unique materials contained in this ISampleNode. More...
int	copyNumber (const INode *node) const
	Returns copyNumber of child, which takes into account existence of children with same name. More...
ParameterPool *	createParameterTree () const
	Creates new parameter pool, with all local parameters and those of its children. More...
std::string	displayName () const
	Returns display name, composed from the name of node and it's copy number. More...
double	DWfactor (kvector_t q) const
	Evaluates the Debye-Waller factor for a given wavevector transfer. More...
virtual double	evaluate (const kvector_t q, double outer_iff=1.0) const
	Evaluates the interference function for a given wavevector transfer. More...
std::vector< const INode * >	getChildren () const override
	Returns a vector of children. More...
const std::string &	getName () const
double	getParticleDensity () const override
	Returns the particle density associated with this 2d lattice. More...
bool	integrationOverXi () const
bool	isMagnetic () const
	Returns true if there is any magnetic material in this ISampleNode. More...
const Lattice2D &	lattice () const
virtual const Material *	material () const
	Returns nullptr, unless overwritten to return a specific material. More...
unsigned	numberUnitCells1 () const
unsigned	numberUnitCells2 () const
virtual void	onChange ()
	Action to be taken in inherited class when a parameter has changed. More...
RealParameter *	parameter (const std::string &name) const
	Returns parameter with given 'name'. More...
ParameterPool *	parameterPool () const
	Returns pointer to the parameter pool. More...
std::string	parametersToString () const
	Returns multiline string representing available parameters. More...
INode *	parent ()
const INode *	parent () const
double	positionVariance () const
	Returns the position variance. More...
std::vector< const INode * >	progeny () const
	Returns a vector of all descendants. More...
void	registerChild (INode *node)
RealParameter &	registerParameter (const std::string &name, double *parpointer)
void	registerVector (const std::string &base_name, kvector_t *p_vec, const std::string &units="nm")
void	removeParameter (const std::string &name)
void	removeVector (const std::string &base_name)
void	setIntegrationOverXi (bool integrate_xi)
void	setName (const std::string &name)
void	setParameterValue (const std::string &name, double value)
virtual void	setParent (const INode *newParent)
void	setPositionVariance (double var)
	Sets the variance of the position for the calculation of the DW factor It is defined as the variance in each relevant dimension. More...
void	setVectorValue (const std::string &base_name, kvector_t value)
virtual bool	supportsMultilayer () const
	Indicates if this interference function can be used with a multilayer (DWBA mode) More...
virtual void	transferToCPP ()
	Used for Python overriding of clone (see swig/tweaks.py) More...
virtual std::string	treeToString () const
	Returns multiline string representing tree structure below the node. More...

Static Public Member Functions
static std::string	XComponentName (const std::string &base_name)
static std::string	YComponentName (const std::string &base_name)
static std::string	ZComponentName (const std::string &base_name)

Protected Member Functions
double	iff_no_inner (const kvector_t q, double outer_iff) const
	Calculates the structure factor in the absence of extra inner structure. More...

Protected Attributes
const size_t	m_NP
std::vector< double >	m_P
double	m_position_var

Private Member Functions
double	iff_without_dw (const kvector_t q) const override
	Calculates the structure factor without Debye-Waller factor. More...
double	interferenceForXi (double xi) const

Private Attributes
bool	m_integrate_xi
	Integrate over the orientation xi. More...
std::unique_ptr< Lattice2D >	m_lattice
unsigned	m_N_1
unsigned	m_N_2
	Size of the finite lattice in lattice units. More...
std::string	m_name
const INode *	m_parent {nullptr}
std::unique_ptr< ParameterPool >	m_pool
	parameter pool (kind of pointer-to-implementation) More...
double	m_qx
double	m_qy

Detailed Description

Interference function of a finite 2D lattice.

Definition at line 24 of file InterferenceFunctionFinite2DLattice.h.

Constructor & Destructor Documentation

InterferenceFunctionFinite2DLattice()

InterferenceFunctionFinite2DLattice::InterferenceFunctionFinite2DLattice	(	const Lattice2D &	lattice,
		unsigned	N_1,
		unsigned	N_2
	)

Constructor of two-dimensional finite lattice interference function.

Parameters

lattice	object specifying a 2d lattice structure
N_1	number of lattice cells in the first lattice direction
N_2	number of lattice cells in the second lattice direction

Definition at line 29 of file InterferenceFunctionFinite2DLattice.cpp.

    : IInterferenceFunction(0), m_integrate_xi(false), m_N_1(N_1), m_N_2(N_2)
{
    setName("InterferenceFinite2DLattice");
    m_lattice.reset(lattice.clone());
    registerChild(m_lattice.get());
}

References Lattice2D::clone(), lattice(), m_lattice, INode::registerChild(), and IParametricComponent::setName().

Referenced by clone().

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~InterferenceFunctionFinite2DLattice()

InterferenceFunctionFinite2DLattice::~InterferenceFunctionFinite2DLattice ( )

overridedefault

Member Function Documentation

accept()

void InterferenceFunctionFinite2DLattice::accept ( INodeVisitor *  visitor ) const

inlineoverridevirtual

Calls the INodeVisitor's visit method.

Implements INode.

Definition at line 31 of file InterferenceFunctionFinite2DLattice.h.

{ visitor->visit(this); }

References INodeVisitor::visit().

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clone()

InterferenceFunctionFinite2DLattice * InterferenceFunctionFinite2DLattice::clone ( ) const

overridevirtual

Returns a clone of this ISampleNode object.

Implements IInterferenceFunction.

Definition at line 40 of file InterferenceFunctionFinite2DLattice.cpp.

{
    auto* ret = new InterferenceFunctionFinite2DLattice(*m_lattice, m_N_1, m_N_2);
    ret->setPositionVariance(m_position_var);
    ret->setIntegrationOverXi(integrationOverXi());
    return ret;
}

References InterferenceFunctionFinite2DLattice(), integrationOverXi(), m_lattice, m_N_1, m_N_2, and IInterferenceFunction::m_position_var.

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containedMaterials()

std::vector< const Material * > ISampleNode::containedMaterials ( ) const

inherited

Returns set of unique materials contained in this ISampleNode.

Definition at line 26 of file ISampleNode.cpp.

{
    std::vector<const Material*> result;
    if (const Material* p_material = material())
        result.push_back(p_material);
    for (const auto* child : getChildren()) {
        if (const ISampleNode* sample = dynamic_cast<const ISampleNode*>(child)) {
            for (const Material* p_material : sample->containedMaterials())
                result.push_back(p_material);
        }
    }
    return result;
}

References INode::getChildren(), and ISampleNode::material().

Referenced by MultiLayerUtils::ContainsCompatibleMaterials(), SampleToPython::initLabels(), and ISampleNode::isMagnetic().

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copyNumber()

int INode::copyNumber ( const INode *  node ) const

inherited

Returns copyNumber of child, which takes into account existence of children with same name.

Definition at line 94 of file INode.cpp.

{
    if (node->parent() != this)
        return -1;
 
    int result(-1), count(0);
    for (auto child : getChildren()) {
 
        if (child == nullptr)
            throw std::runtime_error("INode::copyNumber() -> Error. Nullptr as child.");
 
        if (child == node)
            result = count;
 
        if (child->getName() == node->getName())
            ++count;
    }
 
    return count > 1 ? result : -1;
}

References INode::getChildren(), IParametricComponent::getName(), and INode::parent().

Referenced by INode::displayName().

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createParameterTree()

ParameterPool * INode::createParameterTree ( ) const

virtualinherited

Creates new parameter pool, with all local parameters and those of its children.

Reimplemented from IParametricComponent.

Definition at line 126 of file INode.cpp.

{
    std::unique_ptr<ParameterPool> result(new ParameterPool);
 
    for (const INode* child : progeny()) {
        const std::string path = NodeUtils::nodePath(child, parent()) + "/";
        child->parameterPool()->copyToExternalPool(path, result.get());
    }
 
    return result.release();
}

References NodeUtils::nodePath(), INode::parent(), and INode::progeny().

Referenced by ISimulation::runSimulation(), DepthProbeSimulation::validateParametrization(), OffSpecularSimulation::validateParametrization(), and SpecularSimulation::validateParametrization().

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displayName()

std::string INode::displayName ( ) const

inherited

Returns display name, composed from the name of node and it's copy number.

Definition at line 115 of file INode.cpp.

{
    std::string result = getName();
    if (m_parent) {
        int index = m_parent->copyNumber(this);
        if (index >= 0)
            result = result + std::to_string(index);
    }
    return result;
}

References INode::copyNumber(), IParametricComponent::getName(), and INode::m_parent.

Referenced by NodeUtils::nodePath().

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DWfactor()

double IInterferenceFunction::DWfactor ( kvector_t  q ) const

inherited

Evaluates the Debye-Waller factor for a given wavevector transfer.

Definition at line 48 of file IInterferenceFunction.cpp.

{
    // remove z component for two dimensional interference functions:
    if (supportsMultilayer())
        q.setZ(0.0);
    return std::exp(-q.mag2() * m_position_var);
}

References IInterferenceFunction::m_position_var, BasicVector3D< T >::mag2(), BasicVector3D< T >::setZ(), and IInterferenceFunction::supportsMultilayer().

Referenced by IInterferenceFunction::iff_no_inner().

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evaluate()

double IInterferenceFunction::evaluate ( const kvector_t  q, double  outer_iff = 1.0  ) const

virtualinherited

Evaluates the interference function for a given wavevector transfer.

Reimplemented in InterferenceFunction2DSuperLattice.

Definition at line 35 of file IInterferenceFunction.cpp.

{
    return iff_no_inner(q, outer_iff);
}

References IInterferenceFunction::iff_no_inner().

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getChildren()

std::vector< const INode * > InterferenceFunctionFinite2DLattice::getChildren ( ) const

overridevirtual

Returns a vector of children.

Reimplemented from INode.

Definition at line 68 of file InterferenceFunctionFinite2DLattice.cpp.

{
    return std::vector<const INode*>() << m_lattice;
}

References m_lattice.

getName()

const std::string& IParametricComponent::getName ( ) const

inlineinherited

Definition at line 70 of file IParametricComponent.h.

{ return m_name; }

References IParametricComponent::m_name.

Referenced by Beam::Beam(), ConvolutionDetectorResolution::ConvolutionDetectorResolution(), IDetector::IDetector(), Instrument::Instrument(), IParametricComponent::IParametricComponent(), SampleBuilderNode::SampleBuilderNode(), Layer::clone(), INode::copyNumber(), IParametricComponent::createParameterTree(), IFormFactor::createSlicedFormFactor(), SampleToPython::defineInterferenceFunctions(), INode::displayName(), Beam::operator=(), SampleBuilderNode::operator=(), GUIObjectBuilder::populateInstrumentModel(), PyImportAssistant::populateModels(), GUIDomainSampleVisitor::populateSampleModel(), IParametricComponent::registerParameter(), IFormFactor::sliceFormFactor(), and GUIDomainSampleVisitor::visit().

getParticleDensity()

double InterferenceFunctionFinite2DLattice::getParticleDensity ( ) const

overridevirtual

Returns the particle density associated with this 2d lattice.

Reimplemented from IInterferenceFunction.

Definition at line 62 of file InterferenceFunctionFinite2DLattice.cpp.

{
    double area = m_lattice->unitCellArea();
    return area == 0.0 ? 0.0 : 1.0 / area;
}

References m_lattice.

iff_no_inner()

double IInterferenceFunction::iff_no_inner ( const kvector_t  q, double  outer_iff  ) const

protectedinherited

Calculates the structure factor in the absence of extra inner structure.

Definition at line 56 of file IInterferenceFunction.cpp.

{
    return DWfactor(q) * (iff_without_dw(q) * outer_iff - 1.0) + 1.0;
}

References IInterferenceFunction::DWfactor(), and IInterferenceFunction::iff_without_dw().

Referenced by IInterferenceFunction::evaluate(), and InterferenceFunction2DSuperLattice::interferenceForXi().

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iff_without_dw()

double InterferenceFunctionFinite2DLattice::iff_without_dw ( const kvector_t  q ) const

overrideprivatevirtual

Calculates the structure factor without Debye-Waller factor.

Implements IInterferenceFunction.

Definition at line 73 of file InterferenceFunctionFinite2DLattice.cpp.

{
    m_qx = q.x();
    m_qy = q.y();
    if (!m_integrate_xi)
        return interferenceForXi(m_lattice->rotationAngle());
    return RealIntegrator().integrate([&](double xi) -> double { return interferenceForXi(xi); },
                                      0.0, M_TWOPI)
           / M_TWOPI;
}

References RealIntegrator::integrate(), interferenceForXi(), m_integrate_xi, m_lattice, m_qx, m_qy, M_TWOPI, BasicVector3D< T >::x(), and BasicVector3D< T >::y().

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integrationOverXi()

bool InterferenceFunctionFinite2DLattice::integrationOverXi ( ) const

inline

Definition at line 37 of file InterferenceFunctionFinite2DLattice.h.

{ return m_integrate_xi; }

References m_integrate_xi.

Referenced by clone(), and TransformFromDomain::setFinite2DLatticeItem().

interferenceForXi()

double InterferenceFunctionFinite2DLattice::interferenceForXi ( double  xi ) const

private

Definition at line 84 of file InterferenceFunctionFinite2DLattice.cpp.

{
    double a = m_lattice->length1();
    double b = m_lattice->length2();
    double xialpha = xi + m_lattice->latticeAngle();
 
    double qadiv2 = (m_qx * a * std::cos(xi) + m_qy * a * std::sin(xi)) / 2.0;
    double qbdiv2 = (m_qx * b * std::cos(xialpha) + m_qy * b * std::sin(xialpha)) / 2.0;
    double ampl = Laue(qadiv2, m_N_1) * Laue(qbdiv2, m_N_2);
    double lattice_factor = ampl * ampl / (m_N_1 * m_N_2);
 
    return lattice_factor;
}

References Math::Laue(), m_lattice, m_N_1, m_N_2, m_qx, and m_qy.

Referenced by iff_without_dw().

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isMagnetic()

bool ISampleNode::isMagnetic ( ) const

inherited

Returns true if there is any magnetic material in this ISampleNode.

Definition at line 40 of file ISampleNode.cpp.

{
    const auto materials = containedMaterials();
    return std::any_of(materials.cbegin(), materials.cend(),
                       [](const Material* mat) { return mat->isMagneticMaterial(); });
}

References ISampleNode::containedMaterials().

Referenced by ProcessedSample::initLayouts().

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lattice()

const Lattice2D & InterferenceFunctionFinite2DLattice::lattice

(

)

const

Definition at line 54 of file InterferenceFunctionFinite2DLattice.cpp.

{
    if (!m_lattice)
        throw std::runtime_error("InterferenceFunctionFinite2DLattice::lattice() -> Error. "
                                 "No lattice defined.");
    return *m_lattice;
}

References m_lattice.

Referenced by InterferenceFunctionFinite2DLattice(), and TransformFromDomain::setFinite2DLatticeItem().

material()

virtual const Material* ISampleNode::material ( ) const

inlinevirtualinherited

Returns nullptr, unless overwritten to return a specific material.

Reimplemented in Particle, and Layer.

Definition at line 37 of file ISampleNode.h.

{ return nullptr; }

Referenced by ISampleNode::containedMaterials(), FormFactorCoreShell::setAmbientMaterial(), FormFactorCrystal::setAmbientMaterial(), FormFactorWeighted::setAmbientMaterial(), FormFactorDecoratorMaterial::setAmbientMaterial(), IFormFactorDecorator::setAmbientMaterial(), and FormFactorDecoratorMaterial::setMaterial().

numberUnitCells1()

unsigned InterferenceFunctionFinite2DLattice::numberUnitCells1 ( ) const

inline

Definition at line 33 of file InterferenceFunctionFinite2DLattice.h.

{ return m_N_1; }

References m_N_1.

Referenced by TransformFromDomain::setFinite2DLatticeItem().

numberUnitCells2()

unsigned InterferenceFunctionFinite2DLattice::numberUnitCells2 ( ) const

inline

Definition at line 34 of file InterferenceFunctionFinite2DLattice.h.

{ return m_N_2; }

References m_N_2.

Referenced by TransformFromDomain::setFinite2DLatticeItem().

onChange()

virtual void IParametricComponent::onChange ( )

inlinevirtualinherited

Action to be taken in inherited class when a parameter has changed.

Reimplemented in IProfileRipple, Lattice3D, InterferenceFunction3DLattice, InterferenceFunction2DLattice, FormFactorSphereLogNormalRadius, FormFactorSphereGaussianRadius, FormFactorGaussSphere, ISawtoothRipple, ICosineRipple, IProfileRectangularRipple, FormFactorTruncatedSpheroid, FormFactorTruncatedSphere, FormFactorTruncatedCube, FormFactorTetrahedron, FormFactorPyramid, FormFactorPrism6, FormFactorPrism3, FormFactorLongBoxLorentz, FormFactorLongBoxGauss, FormFactorIcosahedron, FormFactorHollowSphere, FormFactorHemiEllipsoid, FormFactorFullSpheroid, FormFactorFullSphere, FormFactorEllipsoidalCylinder, FormFactorDodecahedron, FormFactorCylinder, FormFactorCuboctahedron, FormFactorCone6, FormFactorCone, FormFactorCantellatedCube, FormFactorBox, FormFactorAnisoPyramid, and Lattice2D.

Definition at line 59 of file IParametricComponent.h.

{}

Referenced by Lattice2D::onChange(), and IParametricComponent::registerParameter().

parameter()

RealParameter * IParametricComponent::parameter ( const std::string &  name ) const

inherited

Returns parameter with given 'name'.

Definition at line 86 of file IParametricComponent.cpp.

{
    return m_pool->parameter(name);
}

References IParametricComponent::m_pool, and RealSpace::Particles::name().

Referenced by DepthProbeSimulation::initialize(), SpecularSimulation::initialize(), Lattice3D::initialize(), IParticle::registerAbundance(), ParticleLayout::registerParticleDensity(), IParticle::registerPosition(), Layer::registerThickness(), Lattice2D::setRotationEnabled(), and DistributionLogNormal::setUnits().

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parameterPool()

ParameterPool* IParametricComponent::parameterPool ( ) const

inlineinherited

Returns pointer to the parameter pool.

Definition at line 39 of file IParametricComponent.h.

{ return m_pool.get(); } // has non-const usages!

References IParametricComponent::m_pool.

Referenced by INode::INode(), IParametricComponent::IParametricComponent(), pyfmt2::argumentList(), SampleBuilderNode::borrow_builder_parameters(), SampleBuilderNode::reset(), and IDistribution1D::setUnits().

parametersToString()

std::string IParametricComponent::parametersToString ( ) const

inherited

Returns multiline string representing available parameters.

Definition at line 43 of file IParametricComponent.cpp.

{
    std::ostringstream result;
    std::unique_ptr<ParameterPool> P_pool(createParameterTree());
    result << *P_pool << "\n";
    return result.str();
}

References IParametricComponent::createParameterTree().

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parent() [1/2]

INode * INode::parent ( )

inherited

Definition at line 89 of file INode.cpp.

{
    return const_cast<INode*>(m_parent);
}

References INode::m_parent.

parent() [2/2]

const INode * INode::parent ( ) const

inherited

Definition at line 84 of file INode.cpp.

{
    return m_parent;
}

References INode::m_parent.

Referenced by INode::copyNumber(), INode::createParameterTree(), ParticleDistribution::generateParticles(), NodeUtils::nodePath(), Lattice2D::onChange(), SampleProvider::setBuilder(), SampleProvider::setParent(), and SampleProvider::setSample().

positionVariance()

double IInterferenceFunction::positionVariance ( ) const

inlineinherited

Returns the position variance.

Definition at line 39 of file IInterferenceFunction.h.

{ return m_position_var; }

References IInterferenceFunction::m_position_var.

Referenced by TransformFromDomain::setFinite2DLatticeItem().

progeny()

std::vector< const INode * > INode::progeny ( ) const

inherited

Returns a vector of all descendants.

Definition at line 68 of file INode.cpp.

{
    std::vector<const INode*> result;
    result.push_back(this);
    for (const auto* child : getChildren()) {
        for (const auto* p : child->progeny())
            result.push_back(p);
    }
    return result;
}

References INode::getChildren().

Referenced by INode::createParameterTree(), and ParticleDistribution::generateParticles().

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registerChild()

void INode::registerChild ( INode *  node )

inherited

Definition at line 57 of file INode.cpp.

{
    ASSERT(node);
    node->setParent(this);
}

References ASSERT, and INode::setParent().

Referenced by Beam::Beam(), Crystal::Crystal(), IDetector::IDetector(), Instrument::Instrument(), InterferenceFunction2DLattice::InterferenceFunction2DLattice(), InterferenceFunction2DParaCrystal::InterferenceFunction2DParaCrystal(), InterferenceFunction2DSuperLattice::InterferenceFunction2DSuperLattice(), InterferenceFunctionFinite2DLattice(), Particle::Particle(), ParticleDistribution::ParticleDistribution(), ParticleLayout::addAndRegisterAbstractParticle(), ParticleCoreShell::addAndRegisterCore(), MultiLayer::addAndRegisterInterface(), MultiLayer::addAndRegisterLayer(), ParticleCoreShell::addAndRegisterShell(), Layer::addLayout(), ParticleComposition::addParticlePointer(), ISimulation::initialize(), MesoCrystal::initialize(), Beam::operator=(), Instrument::operator=(), IParticle::rotate(), ParticleLayout::setAndRegisterInterferenceFunction(), ISimulation::setBackground(), InterferenceFunction1DLattice::setDecayFunction(), InterferenceFunction2DLattice::setDecayFunction(), Instrument::setDetector(), IDetector::setDetectorResolution(), Beam::setFootprintFactor(), Particle::setFormFactor(), InterferenceFunctionFinite3DLattice::setLattice(), InterferenceFunctionRadialParaCrystal::setProbabilityDistribution(), InterferenceFunction2DParaCrystal::setProbabilityDistributions(), ConvolutionDetectorResolution::setResolutionFunction(), IParticle::setRotation(), LayerInterface::setRoughness(), and InterferenceFunction2DSuperLattice::setSubstructureIFF().

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registerParameter()

RealParameter & IParametricComponent::registerParameter ( const std::string &  name, double *  parpointer  )

inherited

Definition at line 51 of file IParametricComponent.cpp.

{
    return m_pool->addParameter(
        new RealParameter(name, data, getName(), [&]() -> void { onChange(); }));
}

References IParametricComponent::getName(), IParametricComponent::m_pool, RealSpace::Particles::name(), and IParametricComponent::onChange().

Referenced by BasicLattice2D::BasicLattice2D(), Beam::Beam(), CylindersInBABuilder::CylindersInBABuilder(), DetectionProperties::DetectionProperties(), HexagonalLattice2D::HexagonalLattice2D(), IInterferenceFunction::IInterferenceFunction(), INode::INode(), InterferenceFunction1DLattice::InterferenceFunction1DLattice(), InterferenceFunction2DParaCrystal::InterferenceFunction2DParaCrystal(), InterferenceFunctionHardDisk::InterferenceFunctionHardDisk(), InterferenceFunctionRadialParaCrystal::InterferenceFunctionRadialParaCrystal(), InterferenceFunctionTwin::InterferenceFunctionTwin(), Lattice2D::Lattice2D(), LayerRoughness::LayerRoughness(), MultiLayer::MultiLayer(), ParticleDistribution::ParticleDistribution(), PlainMultiLayerBySLDBuilder::PlainMultiLayerBySLDBuilder(), ResolutionFunction2DGaussian::ResolutionFunction2DGaussian(), ResonatorBuilder::ResonatorBuilder(), SquareLattice2D::SquareLattice2D(), TriangularRippleBuilder::TriangularRippleBuilder(), IParticle::registerAbundance(), ParticleLayout::registerParticleDensity(), Layer::registerThickness(), IParametricComponent::registerVector(), ParticleLayout::registerWeight(), and Lattice2D::setRotationEnabled().

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registerVector()

void IParametricComponent::registerVector ( const std::string &  base_name, kvector_t *  p_vec, const std::string &  units = "nm"  )

inherited

Definition at line 57 of file IParametricComponent.cpp.

{
    registerParameter(XComponentName(base_name), &((*p_vec)[0])).setUnit(units);
    registerParameter(YComponentName(base_name), &((*p_vec)[1])).setUnit(units);
    registerParameter(ZComponentName(base_name), &((*p_vec)[2])).setUnit(units);
}

References ModelView::Utils::base_name(), IParametricComponent::registerParameter(), RealParameter::setUnit(), IParametricComponent::XComponentName(), IParametricComponent::YComponentName(), and IParametricComponent::ZComponentName().

Referenced by Beam::Beam(), DetectionProperties::DetectionProperties(), InterferenceFunctionTwin::InterferenceFunctionTwin(), MultiLayer::MultiLayer(), Lattice3D::initialize(), and IParticle::registerPosition().

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removeParameter()

void IParametricComponent::removeParameter ( const std::string &  name )

inherited

Definition at line 91 of file IParametricComponent.cpp.

{
    m_pool->removeParameter(name);
}

References IParametricComponent::m_pool, and RealSpace::Particles::name().

Referenced by IParticle::registerAbundance(), ParticleLayout::registerParticleDensity(), Layer::registerThickness(), IParametricComponent::removeVector(), and Lattice2D::setRotationEnabled().

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removeVector()

void IParametricComponent::removeVector ( const std::string &  base_name )

inherited

Definition at line 96 of file IParametricComponent.cpp.

{
    removeParameter(XComponentName(base_name));
    removeParameter(YComponentName(base_name));
    removeParameter(ZComponentName(base_name));
}

References ModelView::Utils::base_name(), IParametricComponent::removeParameter(), IParametricComponent::XComponentName(), IParametricComponent::YComponentName(), and IParametricComponent::ZComponentName().

Referenced by IParticle::registerPosition().

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setIntegrationOverXi()

void InterferenceFunctionFinite2DLattice::setIntegrationOverXi

(

bool

integrate_xi

)

Definition at line 48 of file InterferenceFunctionFinite2DLattice.cpp.

{
    m_integrate_xi = integrate_xi;
    m_lattice->setRotationEnabled(!m_integrate_xi); // deregister Xi in the case of integration
}

References m_integrate_xi, and m_lattice.

setName()

void IParametricComponent::setName ( const std::string &  name )

inlineinherited

Definition at line 69 of file IParametricComponent.h.

{ m_name = name; }

References IParametricComponent::m_name, and RealSpace::Particles::name().

Referenced by BasicLattice2D::BasicLattice2D(), Beam::Beam(), ConvolutionDetectorResolution::ConvolutionDetectorResolution(), Crystal::Crystal(), DetectionProperties::DetectionProperties(), DistributionHandler::DistributionHandler(), FormFactorCoreShell::FormFactorCoreShell(), FormFactorCrystal::FormFactorCrystal(), FormFactorDecoratorMaterial::FormFactorDecoratorMaterial(), FormFactorDecoratorPositionFactor::FormFactorDecoratorPositionFactor(), FormFactorDecoratorRotation::FormFactorDecoratorRotation(), FormFactorWeighted::FormFactorWeighted(), HexagonalLattice2D::HexagonalLattice2D(), IDetector::IDetector(), INode::INode(), Instrument::Instrument(), InterferenceFunction1DLattice::InterferenceFunction1DLattice(), InterferenceFunction2DLattice::InterferenceFunction2DLattice(), InterferenceFunction2DParaCrystal::InterferenceFunction2DParaCrystal(), InterferenceFunction2DSuperLattice::InterferenceFunction2DSuperLattice(), InterferenceFunction3DLattice::InterferenceFunction3DLattice(), InterferenceFunctionFinite2DLattice(), InterferenceFunctionFinite3DLattice::InterferenceFunctionFinite3DLattice(), InterferenceFunctionHardDisk::InterferenceFunctionHardDisk(), InterferenceFunctionNone::InterferenceFunctionNone(), InterferenceFunctionRadialParaCrystal::InterferenceFunctionRadialParaCrystal(), InterferenceFunctionTwin::InterferenceFunctionTwin(), ISampleBuilder::ISampleBuilder(), IsGISAXSDetector::IsGISAXSDetector(), Lattice3D::Lattice3D(), Layer::Layer(), LayerInterface::LayerInterface(), LayerRoughness::LayerRoughness(), MultiLayer::MultiLayer(), ParticleCoreShell::ParticleCoreShell(), ParticleDistribution::ParticleDistribution(), ParticleLayout::ParticleLayout(), RectangularDetector::RectangularDetector(), ResolutionFunction2DGaussian::ResolutionFunction2DGaussian(), SampleBuilderNode::SampleBuilderNode(), SphericalDetector::SphericalDetector(), SquareLattice2D::SquareLattice2D(), Layer::clone(), LayersWithAbsorptionBuilder::createSampleByIndex(), Basic2DParaCrystalBuilder::createSampleByIndex(), ParticleInVacuumBuilder::createSampleByIndex(), SimpleMagneticRotationBuilder::createSampleByIndex(), DepthProbeSimulation::initialize(), GISASSimulation::initialize(), OffSpecularSimulation::initialize(), SpecularSimulation::initialize(), SpecularDetector1D::initialize(), MesoCrystal::initialize(), Particle::initialize(), ParticleComposition::initialize(), Beam::operator=(), SampleBuilderNode::operator=(), SampleBuilderNode::reset(), and SampleBuilderNode::setSBN().

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setParameterValue()

void IParametricComponent::setParameterValue ( const std::string &  name, double  value  )

inherited

Definition at line 65 of file IParametricComponent.cpp.

{
    if (name.find('*') == std::string::npos && name.find('/') == std::string::npos) {
        m_pool->setParameterValue(name, value);
    } else {
        std::unique_ptr<ParameterPool> P_pool{createParameterTree()};
        if (name.find('*') != std::string::npos)
            P_pool->setMatchedParametersValue(name, value);
        else
            P_pool->setParameterValue(name, value);
    }
}

References IParametricComponent::createParameterTree(), IParametricComponent::m_pool, RealSpace::Particles::name(), and ParameterPool::setMatchedParametersValue().

Referenced by AsymRippleBuilder::buildSample(), and IParametricComponent::setVectorValue().

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setParent()

void INode::setParent ( const INode *  newParent )

virtualinherited

Reimplemented in SampleProvider.

Definition at line 79 of file INode.cpp.

{
    m_parent = newParent;
}

References INode::m_parent.

Referenced by INode::registerChild(), SampleProvider::setBuilder(), and SampleProvider::setParent().

setPositionVariance()

void IInterferenceFunction::setPositionVariance ( double  var )

inherited

Sets the variance of the position for the calculation of the DW factor It is defined as the variance in each relevant dimension.

Definition at line 40 of file IInterferenceFunction.cpp.

{
    if (var < 0.0)
        throw std::runtime_error("IInterferenceFunction::setPositionVariance: "
                                 "variance should be positive.");
    m_position_var = var;
}

References IInterferenceFunction::m_position_var.

Referenced by FiniteSquareLattice2DBuilder::buildSample(), SuperLatticeBuilder::buildSample(), and InterferenceFunctionItem::setPositionVariance().

setVectorValue()

void IParametricComponent::setVectorValue ( const std::string &  base_name, kvector_t  value  )

inherited

Definition at line 78 of file IParametricComponent.cpp.

{
    setParameterValue(XComponentName(base_name), value.x());
    setParameterValue(YComponentName(base_name), value.y());
    setParameterValue(ZComponentName(base_name), value.z());
}

References ModelView::Utils::base_name(), IParametricComponent::setParameterValue(), BasicVector3D< T >::x(), IParametricComponent::XComponentName(), BasicVector3D< T >::y(), IParametricComponent::YComponentName(), BasicVector3D< T >::z(), and IParametricComponent::ZComponentName().

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supportsMultilayer()

virtual bool IInterferenceFunction::supportsMultilayer ( ) const

inlinevirtualinherited

Indicates if this interference function can be used with a multilayer (DWBA mode)

Reimplemented in InterferenceFunctionFinite3DLattice, and InterferenceFunction3DLattice.

Definition at line 46 of file IInterferenceFunction.h.

{ return true; }

Referenced by IInterferenceFunction::DWfactor().

transferToCPP()

virtual void ICloneable::transferToCPP ( )

inlinevirtualinherited

Used for Python overriding of clone (see swig/tweaks.py)

Definition at line 34 of file ICloneable.h.

treeToString()

std::string INode::treeToString ( ) const

virtualinherited

Returns multiline string representing tree structure below the node.

Definition at line 52 of file INode.cpp.

{
    return NodeUtils::nodeToString(this);
}

References NodeUtils::nodeToString().

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XComponentName()

std::string IParametricComponent::XComponentName ( const std::string &  base_name )

staticinherited

Definition at line 103 of file IParametricComponent.cpp.

{
    return base_name + "X";
}

References ModelView::Utils::base_name().

Referenced by Lattice3D::initialize(), IParticle::registerPosition(), IParametricComponent::registerVector(), IParametricComponent::removeVector(), IParametricComponent::setVectorValue(), and VectorParameterTranslator::translate().

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YComponentName()

std::string IParametricComponent::YComponentName ( const std::string &  base_name )

staticinherited

Definition at line 108 of file IParametricComponent.cpp.

{
    return base_name + "Y";
}

References ModelView::Utils::base_name().

Referenced by IParametricComponent::registerVector(), IParametricComponent::removeVector(), IParametricComponent::setVectorValue(), and VectorParameterTranslator::translate().

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ZComponentName()

std::string IParametricComponent::ZComponentName ( const std::string &  base_name )

staticinherited

Definition at line 113 of file IParametricComponent.cpp.

{
    return base_name + "Z";
}

References ModelView::Utils::base_name().

Referenced by IParametricComponent::registerVector(), IParametricComponent::removeVector(), IParametricComponent::setVectorValue(), and VectorParameterTranslator::translate().

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Member Data Documentation

m_integrate_xi

bool InterferenceFunctionFinite2DLattice::m_integrate_xi

private

Integrate over the orientation xi.

Definition at line 51 of file InterferenceFunctionFinite2DLattice.h.

Referenced by iff_without_dw(), integrationOverXi(), and setIntegrationOverXi().

m_lattice

std::unique_ptr<Lattice2D> InterferenceFunctionFinite2DLattice::m_lattice

private

Definition at line 52 of file InterferenceFunctionFinite2DLattice.h.

Referenced by InterferenceFunctionFinite2DLattice(), clone(), getChildren(), getParticleDensity(), iff_without_dw(), interferenceForXi(), lattice(), and setIntegrationOverXi().

m_N_1

unsigned InterferenceFunctionFinite2DLattice::m_N_1

private

Definition at line 53 of file InterferenceFunctionFinite2DLattice.h.

Referenced by clone(), interferenceForXi(), and numberUnitCells1().

m_N_2

unsigned InterferenceFunctionFinite2DLattice::m_N_2

private

Size of the finite lattice in lattice units.

Definition at line 53 of file InterferenceFunctionFinite2DLattice.h.

Referenced by clone(), interferenceForXi(), and numberUnitCells2().

m_name

std::string IParametricComponent::m_name

privateinherited

Definition at line 73 of file IParametricComponent.h.

Referenced by IParametricComponent::getName(), and IParametricComponent::setName().

m_NP

const size_t INode::m_NP

protectedinherited

Definition at line 88 of file INode.h.

Referenced by INode::INode().

m_P

std::vector<double> INode::m_P

protectedinherited

Definition at line 89 of file INode.h.

Referenced by INode::INode(), and IFootprintFactor::setWidthRatio().

m_parent

const INode* INode::m_parent {nullptr}

privateinherited

Definition at line 83 of file INode.h.

Referenced by INode::displayName(), INode::parent(), and INode::setParent().

m_pool

std::unique_ptr<ParameterPool> IParametricComponent::m_pool

privateinherited

parameter pool (kind of pointer-to-implementation)

Definition at line 74 of file IParametricComponent.h.

Referenced by IParametricComponent::createParameterTree(), IParametricComponent::parameter(), IParametricComponent::parameterPool(), IParametricComponent::registerParameter(), IParametricComponent::removeParameter(), and IParametricComponent::setParameterValue().

m_position_var

double IInterferenceFunction::m_position_var

protectedinherited

Definition at line 52 of file IInterferenceFunction.h.

Referenced by IInterferenceFunction::IInterferenceFunction(), InterferenceFunctionNone::clone(), InterferenceFunctionRadialParaCrystal::clone(), InterferenceFunctionTwin::clone(), InterferenceFunction1DLattice::clone(), InterferenceFunction2DLattice::clone(), InterferenceFunction2DParaCrystal::clone(), InterferenceFunction2DSuperLattice::clone(), InterferenceFunction3DLattice::clone(), clone(), InterferenceFunctionFinite3DLattice::clone(), InterferenceFunctionHardDisk::clone(), IInterferenceFunction::DWfactor(), IInterferenceFunction::positionVariance(), and IInterferenceFunction::setPositionVariance().

m_qx

double InterferenceFunctionFinite2DLattice::m_qx

mutableprivate

Definition at line 54 of file InterferenceFunctionFinite2DLattice.h.

Referenced by iff_without_dw(), and interferenceForXi().

m_qy

double InterferenceFunctionFinite2DLattice::m_qy

mutableprivate

Definition at line 55 of file InterferenceFunctionFinite2DLattice.h.

Referenced by iff_without_dw(), and interferenceForXi().

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The documentation for this class was generated from the following files:

• /home/www/ba/Sample/Aggregate/InterferenceFunctionFinite2DLattice.h
• /home/www/ba/Sample/Aggregate/InterferenceFunctionFinite2DLattice.cpp