BornAgain  1.19.0
Simulate and fit neutron and x-ray scattering at grazing incidence
FTDecayFunction1DGauss Class Reference

One-dimensional Gauss decay function in reciprocal space; corresponds to exp[-x^2/(2*decay_length^2)] in real space. More...

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Public Member Functions

 FTDecayFunction1DGauss (const std::vector< double > P)
 
 FTDecayFunction1DGauss (double decay_length)
 
void accept (INodeVisitor *visitor) const final
 Calls the INodeVisitor's visit method. More...
 
FTDecayFunction1DGaussclone () const
 
int copyNumber (const INode *node) const
 Returns copyNumber of child, which takes into account existence of children with same name. More...
 
ParameterPoolcreateParameterTree () const
 Creates new parameter pool, with all local parameters and those of its children. More...
 
double decayLength () const
 
std::string displayName () const
 Returns display name, composed from the name of node and it's copy number. More...
 
double evaluate (double q) const final
 
virtual std::vector< const INode * > getChildren () const
 Returns a vector of children. More...
 
const std::string & getName () const
 
virtual void onChange ()
 Action to be taken in inherited class when a parameter has changed. More...
 
RealParameterparameter (const std::string &name) const
 Returns parameter with given 'name'. More...
 
ParameterPoolparameterPool () const
 Returns pointer to the parameter pool. More...
 
std::string parametersToString () const
 Returns multiline string representing available parameters. More...
 
INodeparent ()
 
const INodeparent () const
 
std::vector< const INode * > progeny () const
 Returns a vector of all descendants. More...
 
void registerChild (INode *node)
 
RealParameterregisterParameter (const std::string &name, double *parpointer)
 
void registerVector (const std::string &base_name, kvector_t *p_vec, const std::string &units="nm")
 
void removeParameter (const std::string &name)
 
void removeVector (const std::string &base_name)
 
void setName (const std::string &name)
 
void setParameterValue (const std::string &name, double value)
 
virtual void setParent (const INode *newParent)
 
void setVectorValue (const std::string &base_name, kvector_t value)
 
virtual void transferToCPP ()
 Used for Python overriding of clone (see swig/tweaks.py) More...
 
virtual std::string treeToString () const
 Returns multiline string representing tree structure below the node. More...
 

Static Public Member Functions

static std::string XComponentName (const std::string &base_name)
 
static std::string YComponentName (const std::string &base_name)
 
static std::string ZComponentName (const std::string &base_name)
 

Protected Attributes

const double & m_decay_length
 
const size_t m_NP
 
std::vector< double > m_P
 

Private Attributes

std::string m_name
 
const INodem_parent {nullptr}
 
std::unique_ptr< ParameterPoolm_pool
 parameter pool (kind of pointer-to-implementation) More...
 

Detailed Description

One-dimensional Gauss decay function in reciprocal space; corresponds to exp[-x^2/(2*decay_length^2)] in real space.

Definition at line 59 of file FTDecay1D.h.

Constructor & Destructor Documentation

◆ FTDecayFunction1DGauss() [1/2]

FTDecayFunction1DGauss::FTDecayFunction1DGauss ( const std::vector< double >  P)

Definition at line 58 of file FTDecay1D.cpp.

59  : IFTDecayFunction1D({"FTDecayFunction1DGauss", "class_tooltip", {}}, P)
60 {
61 }
IFTDecayFunction1D(const NodeMeta &meta, const std::vector< double > &PValues)
Definition: FTDecay1D.cpp:23

Referenced by clone().

◆ FTDecayFunction1DGauss() [2/2]

FTDecayFunction1DGauss::FTDecayFunction1DGauss ( double  decay_length)

Definition at line 63 of file FTDecay1D.cpp.

64  : FTDecayFunction1DGauss(std::vector<double>{decay_length})
65 {
66 }
FTDecayFunction1DGauss(const std::vector< double > P)
Definition: FTDecay1D.cpp:58

Member Function Documentation

◆ accept()

void FTDecayFunction1DGauss::accept ( INodeVisitor visitor) const
inlinefinalvirtual

Calls the INodeVisitor's visit method.

Implements INode.

Definition at line 65 of file FTDecay1D.h.

65 { visitor->visit(this); }
virtual void visit(const BasicLattice2D *)
Definition: INodeVisitor.h:151

◆ clone()

FTDecayFunction1DGauss * FTDecayFunction1DGauss::clone ( ) const
virtual

Implements IFTDecayFunction1D.

Definition at line 68 of file FTDecay1D.cpp.

69 {
71 }
const double & m_decay_length
Definition: FTDecay1D.h:38

References FTDecayFunction1DGauss(), and IFTDecayFunction1D::m_decay_length.

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◆ copyNumber()

int INode::copyNumber ( const INode node) const
inherited

Returns copyNumber of child, which takes into account existence of children with same name.

Definition at line 94 of file INode.cpp.

95 {
96  if (node->parent() != this)
97  return -1;
98 
99  int result(-1), count(0);
100  for (auto child : getChildren()) {
101 
102  if (child == nullptr)
103  throw std::runtime_error("INode::copyNumber() -> Error. Nullptr as child.");
104 
105  if (child == node)
106  result = count;
107 
108  if (child->getName() == node->getName())
109  ++count;
110  }
111 
112  return count > 1 ? result : -1;
113 }
const INode * parent() const
Definition: INode.cpp:84
virtual std::vector< const INode * > getChildren() const
Returns a vector of children.
Definition: INode.cpp:63
const std::string & getName() const

References INode::getChildren(), IParametricComponent::getName(), and INode::parent().

Referenced by INode::displayName().

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◆ createParameterTree()

ParameterPool * INode::createParameterTree ( ) const
virtualinherited

Creates new parameter pool, with all local parameters and those of its children.

Reimplemented from IParametricComponent.

Definition at line 126 of file INode.cpp.

127 {
128  std::unique_ptr<ParameterPool> result(new ParameterPool);
129 
130  for (const INode* child : progeny()) {
131  const std::string path = NodeUtils::nodePath(child, parent()) + "/";
132  child->parameterPool()->copyToExternalPool(path, result.get());
133  }
134 
135  return result.release();
136 }
Base class for tree-like structures containing parameterized objects.
Definition: INode.h:49
std::vector< const INode * > progeny() const
Returns a vector of all descendants.
Definition: INode.cpp:68
Container with parameters for IParametricComponent object.
Definition: ParameterPool.h:29
std::string nodePath(const INode *node, const INode *root=nullptr)
Returns path composed of node's displayName, with respect to root node.
Definition: NodeUtils.cpp:89

References NodeUtils::nodePath(), INode::parent(), and INode::progeny().

Referenced by ISimulation::runSimulation(), DepthProbeSimulation::validateParametrization(), OffSpecularSimulation::validateParametrization(), and SpecularSimulation::validateParametrization().

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◆ decayLength()

double IFTDecayFunction1D::decayLength ( ) const
inlineinherited

Definition at line 35 of file FTDecay1D.h.

35 { return m_decay_length; }

References IFTDecayFunction1D::m_decay_length.

◆ displayName()

std::string INode::displayName ( ) const
inherited

Returns display name, composed from the name of node and it's copy number.

Definition at line 115 of file INode.cpp.

116 {
117  std::string result = getName();
118  if (m_parent) {
119  int index = m_parent->copyNumber(this);
120  if (index >= 0)
121  result = result + std::to_string(index);
122  }
123  return result;
124 }
const INode * m_parent
Definition: INode.h:83
int copyNumber(const INode *node) const
Returns copyNumber of child, which takes into account existence of children with same name.
Definition: INode.cpp:94

References INode::copyNumber(), IParametricComponent::getName(), and INode::m_parent.

Referenced by NodeUtils::nodePath().

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◆ evaluate()

double FTDecayFunction1DGauss::evaluate ( double  q) const
finalvirtual

Implements IFTDecayFunction1D.

Definition at line 73 of file FTDecay1D.cpp.

74 {
75  double sum_sq = q * q * m_decay_length * m_decay_length;
76  return m_decay_length * std::sqrt(M_TWOPI) * std::exp(-sum_sq / 2.0);
77 }
#define M_TWOPI
Definition: Constants.h:54

References IFTDecayFunction1D::m_decay_length, and M_TWOPI.

◆ getChildren()

◆ getName()

◆ onChange()

◆ parameter()

RealParameter * IParametricComponent::parameter ( const std::string &  name) const
inherited

Returns parameter with given 'name'.

Definition at line 86 of file IParametricComponent.cpp.

87 {
88  return m_pool->parameter(name);
89 }
std::unique_ptr< ParameterPool > m_pool
parameter pool (kind of pointer-to-implementation)
QString const & name(EShape k)
Definition: particles.cpp:21

References IParametricComponent::m_pool, and RealSpace::Particles::name().

Referenced by DepthProbeSimulation::initialize(), SpecularSimulation::initialize(), Lattice3D::initialize(), IParticle::registerAbundance(), ParticleLayout::registerParticleDensity(), IParticle::registerPosition(), Layer::registerThickness(), Lattice2D::setRotationEnabled(), and DistributionLogNormal::setUnits().

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◆ parameterPool()

ParameterPool* IParametricComponent::parameterPool ( ) const
inlineinherited

Returns pointer to the parameter pool.

Definition at line 39 of file IParametricComponent.h.

39 { return m_pool.get(); } // has non-const usages!

References IParametricComponent::m_pool.

Referenced by INode::INode(), IParametricComponent::IParametricComponent(), pyfmt2::argumentList(), SampleBuilderNode::borrow_builder_parameters(), SampleBuilderNode::reset(), and IDistribution1D::setUnits().

◆ parametersToString()

std::string IParametricComponent::parametersToString ( ) const
inherited

Returns multiline string representing available parameters.

Definition at line 43 of file IParametricComponent.cpp.

44 {
45  std::ostringstream result;
46  std::unique_ptr<ParameterPool> P_pool(createParameterTree());
47  result << *P_pool << "\n";
48  return result.str();
49 }
virtual ParameterPool * createParameterTree() const
Creates new parameter pool, with all local parameters and those of its children.

References IParametricComponent::createParameterTree().

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◆ parent() [1/2]

INode * INode::parent ( )
inherited

Definition at line 89 of file INode.cpp.

90 {
91  return const_cast<INode*>(m_parent);
92 }

References INode::m_parent.

◆ parent() [2/2]

◆ progeny()

std::vector< const INode * > INode::progeny ( ) const
inherited

Returns a vector of all descendants.

Definition at line 68 of file INode.cpp.

69 {
70  std::vector<const INode*> result;
71  result.push_back(this);
72  for (const auto* child : getChildren()) {
73  for (const auto* p : child->progeny())
74  result.push_back(p);
75  }
76  return result;
77 }

References INode::getChildren().

Referenced by INode::createParameterTree(), and ParticleDistribution::generateParticles().

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◆ registerChild()

void INode::registerChild ( INode node)
inherited

Definition at line 57 of file INode.cpp.

58 {
59  ASSERT(node);
60  node->setParent(this);
61 }
#define ASSERT(condition)
Definition: Assert.h:31
virtual void setParent(const INode *newParent)
Definition: INode.cpp:79

References ASSERT, and INode::setParent().

Referenced by Beam::Beam(), Crystal::Crystal(), IDetector::IDetector(), Instrument::Instrument(), InterferenceFunction2DLattice::InterferenceFunction2DLattice(), InterferenceFunction2DParaCrystal::InterferenceFunction2DParaCrystal(), InterferenceFunction2DSuperLattice::InterferenceFunction2DSuperLattice(), InterferenceFunctionFinite2DLattice::InterferenceFunctionFinite2DLattice(), Particle::Particle(), ParticleDistribution::ParticleDistribution(), ParticleLayout::addAndRegisterAbstractParticle(), ParticleCoreShell::addAndRegisterCore(), MultiLayer::addAndRegisterInterface(), MultiLayer::addAndRegisterLayer(), ParticleCoreShell::addAndRegisterShell(), Layer::addLayout(), ParticleComposition::addParticlePointer(), ISimulation::initialize(), MesoCrystal::initialize(), Beam::operator=(), Instrument::operator=(), IParticle::rotate(), ParticleLayout::setAndRegisterInterferenceFunction(), ISimulation::setBackground(), InterferenceFunction1DLattice::setDecayFunction(), InterferenceFunction2DLattice::setDecayFunction(), Instrument::setDetector(), IDetector::setDetectorResolution(), Beam::setFootprintFactor(), Particle::setFormFactor(), InterferenceFunctionFinite3DLattice::setLattice(), InterferenceFunctionRadialParaCrystal::setProbabilityDistribution(), InterferenceFunction2DParaCrystal::setProbabilityDistributions(), ConvolutionDetectorResolution::setResolutionFunction(), IParticle::setRotation(), LayerInterface::setRoughness(), and InterferenceFunction2DSuperLattice::setSubstructureIFF().

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◆ registerParameter()

RealParameter & IParametricComponent::registerParameter ( const std::string &  name,
double *  parpointer 
)
inherited

Definition at line 51 of file IParametricComponent.cpp.

52 {
53  return m_pool->addParameter(
54  new RealParameter(name, data, getName(), [&]() -> void { onChange(); }));
55 }
virtual void onChange()
Action to be taken in inherited class when a parameter has changed.
Wraps a parameter of type double.
Definition: RealParameter.h:31

References IParametricComponent::getName(), IParametricComponent::m_pool, RealSpace::Particles::name(), and IParametricComponent::onChange().

Referenced by BasicLattice2D::BasicLattice2D(), Beam::Beam(), CylindersInBABuilder::CylindersInBABuilder(), DetectionProperties::DetectionProperties(), HexagonalLattice2D::HexagonalLattice2D(), IInterferenceFunction::IInterferenceFunction(), INode::INode(), InterferenceFunction1DLattice::InterferenceFunction1DLattice(), InterferenceFunction2DParaCrystal::InterferenceFunction2DParaCrystal(), InterferenceFunctionHardDisk::InterferenceFunctionHardDisk(), InterferenceFunctionRadialParaCrystal::InterferenceFunctionRadialParaCrystal(), InterferenceFunctionTwin::InterferenceFunctionTwin(), Lattice2D::Lattice2D(), LayerRoughness::LayerRoughness(), MultiLayer::MultiLayer(), ParticleDistribution::ParticleDistribution(), PlainMultiLayerBySLDBuilder::PlainMultiLayerBySLDBuilder(), ResolutionFunction2DGaussian::ResolutionFunction2DGaussian(), ResonatorBuilder::ResonatorBuilder(), SquareLattice2D::SquareLattice2D(), TriangularRippleBuilder::TriangularRippleBuilder(), IParticle::registerAbundance(), ParticleLayout::registerParticleDensity(), Layer::registerThickness(), IParametricComponent::registerVector(), ParticleLayout::registerWeight(), and Lattice2D::setRotationEnabled().

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◆ registerVector()

void IParametricComponent::registerVector ( const std::string &  base_name,
kvector_t p_vec,
const std::string &  units = "nm" 
)
inherited

Definition at line 57 of file IParametricComponent.cpp.

59 {
60  registerParameter(XComponentName(base_name), &((*p_vec)[0])).setUnit(units);
61  registerParameter(YComponentName(base_name), &((*p_vec)[1])).setUnit(units);
62  registerParameter(ZComponentName(base_name), &((*p_vec)[2])).setUnit(units);
63 }
static std::string XComponentName(const std::string &base_name)
static std::string ZComponentName(const std::string &base_name)
RealParameter & registerParameter(const std::string &name, double *parpointer)
static std::string YComponentName(const std::string &base_name)
RealParameter & setUnit(const std::string &name)
MVVM_MODEL_EXPORT std::string base_name(const std::string &path)
Provide the filename of a file path.
Definition: fileutils.cpp:78

References ModelView::Utils::base_name(), IParametricComponent::registerParameter(), RealParameter::setUnit(), IParametricComponent::XComponentName(), IParametricComponent::YComponentName(), and IParametricComponent::ZComponentName().

Referenced by Beam::Beam(), DetectionProperties::DetectionProperties(), InterferenceFunctionTwin::InterferenceFunctionTwin(), MultiLayer::MultiLayer(), Lattice3D::initialize(), and IParticle::registerPosition().

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◆ removeParameter()

void IParametricComponent::removeParameter ( const std::string &  name)
inherited

Definition at line 91 of file IParametricComponent.cpp.

92 {
93  m_pool->removeParameter(name);
94 }

References IParametricComponent::m_pool, and RealSpace::Particles::name().

Referenced by IParticle::registerAbundance(), ParticleLayout::registerParticleDensity(), Layer::registerThickness(), IParametricComponent::removeVector(), and Lattice2D::setRotationEnabled().

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◆ removeVector()

void IParametricComponent::removeVector ( const std::string &  base_name)
inherited

Definition at line 96 of file IParametricComponent.cpp.

References ModelView::Utils::base_name(), IParametricComponent::removeParameter(), IParametricComponent::XComponentName(), IParametricComponent::YComponentName(), and IParametricComponent::ZComponentName().

Referenced by IParticle::registerPosition().

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◆ setName()

void IParametricComponent::setName ( const std::string &  name)
inlineinherited

Definition at line 69 of file IParametricComponent.h.

69 { m_name = name; }

References IParametricComponent::m_name, and RealSpace::Particles::name().

Referenced by BasicLattice2D::BasicLattice2D(), Beam::Beam(), ConvolutionDetectorResolution::ConvolutionDetectorResolution(), Crystal::Crystal(), DetectionProperties::DetectionProperties(), DistributionHandler::DistributionHandler(), FormFactorCoreShell::FormFactorCoreShell(), FormFactorCrystal::FormFactorCrystal(), FormFactorDecoratorMaterial::FormFactorDecoratorMaterial(), FormFactorDecoratorPositionFactor::FormFactorDecoratorPositionFactor(), FormFactorDecoratorRotation::FormFactorDecoratorRotation(), FormFactorWeighted::FormFactorWeighted(), HexagonalLattice2D::HexagonalLattice2D(), IDetector::IDetector(), INode::INode(), Instrument::Instrument(), InterferenceFunction1DLattice::InterferenceFunction1DLattice(), InterferenceFunction2DLattice::InterferenceFunction2DLattice(), InterferenceFunction2DParaCrystal::InterferenceFunction2DParaCrystal(), InterferenceFunction2DSuperLattice::InterferenceFunction2DSuperLattice(), InterferenceFunction3DLattice::InterferenceFunction3DLattice(), InterferenceFunctionFinite2DLattice::InterferenceFunctionFinite2DLattice(), InterferenceFunctionFinite3DLattice::InterferenceFunctionFinite3DLattice(), InterferenceFunctionHardDisk::InterferenceFunctionHardDisk(), InterferenceFunctionNone::InterferenceFunctionNone(), InterferenceFunctionRadialParaCrystal::InterferenceFunctionRadialParaCrystal(), InterferenceFunctionTwin::InterferenceFunctionTwin(), ISampleBuilder::ISampleBuilder(), IsGISAXSDetector::IsGISAXSDetector(), Lattice3D::Lattice3D(), Layer::Layer(), LayerInterface::LayerInterface(), LayerRoughness::LayerRoughness(), MultiLayer::MultiLayer(), ParticleCoreShell::ParticleCoreShell(), ParticleDistribution::ParticleDistribution(), ParticleLayout::ParticleLayout(), RectangularDetector::RectangularDetector(), ResolutionFunction2DGaussian::ResolutionFunction2DGaussian(), SampleBuilderNode::SampleBuilderNode(), SphericalDetector::SphericalDetector(), SquareLattice2D::SquareLattice2D(), Layer::clone(), LayersWithAbsorptionBuilder::createSampleByIndex(), Basic2DParaCrystalBuilder::createSampleByIndex(), ParticleInVacuumBuilder::createSampleByIndex(), SimpleMagneticRotationBuilder::createSampleByIndex(), DepthProbeSimulation::initialize(), GISASSimulation::initialize(), OffSpecularSimulation::initialize(), SpecularSimulation::initialize(), SpecularDetector1D::initialize(), MesoCrystal::initialize(), Particle::initialize(), ParticleComposition::initialize(), Beam::operator=(), SampleBuilderNode::operator=(), SampleBuilderNode::reset(), and SampleBuilderNode::setSBN().

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◆ setParameterValue()

void IParametricComponent::setParameterValue ( const std::string &  name,
double  value 
)
inherited

Definition at line 65 of file IParametricComponent.cpp.

66 {
67  if (name.find('*') == std::string::npos && name.find('/') == std::string::npos) {
68  m_pool->setParameterValue(name, value);
69  } else {
70  std::unique_ptr<ParameterPool> P_pool{createParameterTree()};
71  if (name.find('*') != std::string::npos)
72  P_pool->setMatchedParametersValue(name, value);
73  else
74  P_pool->setParameterValue(name, value);
75  }
76 }
int setMatchedParametersValue(const std::string &wildcards, double value)
Sets value of the nonzero parameters that match pattern ('*' allowed), or throws.

References IParametricComponent::createParameterTree(), IParametricComponent::m_pool, RealSpace::Particles::name(), and ParameterPool::setMatchedParametersValue().

Referenced by AsymRippleBuilder::buildSample(), and IParametricComponent::setVectorValue().

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◆ setParent()

void INode::setParent ( const INode newParent)
virtualinherited

Reimplemented in SampleProvider.

Definition at line 79 of file INode.cpp.

80 {
81  m_parent = newParent;
82 }

References INode::m_parent.

Referenced by INode::registerChild(), SampleProvider::setBuilder(), and SampleProvider::setParent().

◆ setVectorValue()

void IParametricComponent::setVectorValue ( const std::string &  base_name,
kvector_t  value 
)
inherited

Definition at line 78 of file IParametricComponent.cpp.

79 {
83 }
T z() const
Returns z-component in cartesian coordinate system.
Definition: BasicVector3D.h:67
T y() const
Returns y-component in cartesian coordinate system.
Definition: BasicVector3D.h:65
T x() const
Returns x-component in cartesian coordinate system.
Definition: BasicVector3D.h:63
void setParameterValue(const std::string &name, double value)

References ModelView::Utils::base_name(), IParametricComponent::setParameterValue(), BasicVector3D< T >::x(), IParametricComponent::XComponentName(), BasicVector3D< T >::y(), IParametricComponent::YComponentName(), BasicVector3D< T >::z(), and IParametricComponent::ZComponentName().

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◆ transferToCPP()

virtual void ICloneable::transferToCPP ( )
inlinevirtualinherited

Used for Python overriding of clone (see swig/tweaks.py)

Definition at line 34 of file ICloneable.h.

◆ treeToString()

std::string INode::treeToString ( ) const
virtualinherited

Returns multiline string representing tree structure below the node.

Definition at line 52 of file INode.cpp.

53 {
54  return NodeUtils::nodeToString(this);
55 }
std::string nodeToString(const INode *node)
Returns multiline string representing tree structure starting from given node.
Definition: NodeUtils.cpp:81

References NodeUtils::nodeToString().

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◆ XComponentName()

std::string IParametricComponent::XComponentName ( const std::string &  base_name)
staticinherited

Definition at line 103 of file IParametricComponent.cpp.

104 {
105  return base_name + "X";
106 }

References ModelView::Utils::base_name().

Referenced by Lattice3D::initialize(), IParticle::registerPosition(), IParametricComponent::registerVector(), IParametricComponent::removeVector(), IParametricComponent::setVectorValue(), and VectorParameterTranslator::translate().

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◆ YComponentName()

std::string IParametricComponent::YComponentName ( const std::string &  base_name)
staticinherited

Definition at line 108 of file IParametricComponent.cpp.

109 {
110  return base_name + "Y";
111 }

References ModelView::Utils::base_name().

Referenced by IParametricComponent::registerVector(), IParametricComponent::removeVector(), IParametricComponent::setVectorValue(), and VectorParameterTranslator::translate().

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◆ ZComponentName()

std::string IParametricComponent::ZComponentName ( const std::string &  base_name)
staticinherited

Definition at line 113 of file IParametricComponent.cpp.

114 {
115  return base_name + "Z";
116 }

References ModelView::Utils::base_name().

Referenced by IParametricComponent::registerVector(), IParametricComponent::removeVector(), IParametricComponent::setVectorValue(), and VectorParameterTranslator::translate().

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Member Data Documentation

◆ m_decay_length

◆ m_name

std::string IParametricComponent::m_name
privateinherited

◆ m_NP

const size_t INode::m_NP
protectedinherited

Definition at line 88 of file INode.h.

Referenced by INode::INode().

◆ m_P

std::vector<double> INode::m_P
protectedinherited

Definition at line 89 of file INode.h.

Referenced by INode::INode(), and IFootprintFactor::setWidthRatio().

◆ m_parent

const INode* INode::m_parent {nullptr}
privateinherited

Definition at line 83 of file INode.h.

Referenced by INode::displayName(), INode::parent(), and INode::setParent().

◆ m_pool


The documentation for this class was generated from the following files: