BornAgain
1.19.0
Simulate and fit neutron and x-ray scattering at grazing incidence
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Two-dimensional pseudo-Voigt decay function in reciprocal space; corresponds to eta*Gauss + (1-eta)*Cauchy. More...
Public Member Functions | |
FTDecayFunction2DVoigt (const std::vector< double > P) | |
FTDecayFunction2DVoigt (double decay_length_x, double decay_length_y, double gamma, double eta) | |
void | accept (INodeVisitor *visitor) const final |
Calls the INodeVisitor's visit method. More... | |
std::pair< double, double > | boundingReciprocalLatticeCoordinates (double qX, double qY, double a, double b, double alpha) const |
transform back to a*, b* basis: More... | |
FTDecayFunction2DVoigt * | clone () const |
int | copyNumber (const INode *node) const |
Returns copyNumber of child, which takes into account existence of children with same name. More... | |
ParameterPool * | createParameterTree () const |
Creates new parameter pool, with all local parameters and those of its children. More... | |
double | decayLengthX () const |
get decay length in distribution's X-direction More... | |
double | decayLengthY () const |
get decay length in distribution's Y-direction More... | |
std::string | displayName () const |
Returns display name, composed from the name of node and it's copy number. More... | |
double | eta () const |
double | evaluate (double qx, double qy) const final |
evaluate Fourier transformed decay function for q in X,Y coordinates More... | |
double | gamma () const |
get angle between first lattice vector and X-axis of distribution (both in direct space) More... | |
virtual std::vector< const INode * > | getChildren () const |
Returns a vector of children. More... | |
const std::string & | getName () const |
virtual void | onChange () |
Action to be taken in inherited class when a parameter has changed. More... | |
RealParameter * | parameter (const std::string &name) const |
Returns parameter with given 'name'. More... | |
ParameterPool * | parameterPool () const |
Returns pointer to the parameter pool. More... | |
std::string | parametersToString () const |
Returns multiline string representing available parameters. More... | |
INode * | parent () |
const INode * | parent () const |
std::vector< const INode * > | progeny () const |
Returns a vector of all descendants. More... | |
void | registerChild (INode *node) |
RealParameter & | registerParameter (const std::string &name, double *parpointer) |
void | registerVector (const std::string &base_name, kvector_t *p_vec, const std::string &units="nm") |
void | removeParameter (const std::string &name) |
void | removeVector (const std::string &base_name) |
void | setName (const std::string &name) |
void | setParameterValue (const std::string &name, double value) |
virtual void | setParent (const INode *newParent) |
void | setVectorValue (const std::string &base_name, kvector_t value) |
virtual void | transferToCPP () |
Used for Python overriding of clone (see swig/tweaks.py) More... | |
virtual std::string | treeToString () const |
Returns multiline string representing tree structure below the node. More... | |
Static Public Member Functions | |
static std::string | XComponentName (const std::string &base_name) |
static std::string | YComponentName (const std::string &base_name) |
static std::string | ZComponentName (const std::string &base_name) |
Protected Attributes | |
const double & | m_decay_length_x |
const double & | m_decay_length_y |
const double & | m_eta |
const double & | m_gamma |
const size_t | m_NP |
std::vector< double > | m_P |
Private Member Functions | |
std::pair< double, double > | transformToRecLatticeCoordinates (double qX, double qY, double a, double b, double alpha) const |
transform reciprocal coordinate system of this decay function to the reciprocal lattice system More... | |
Private Attributes | |
std::string | m_name |
const INode * | m_parent {nullptr} |
std::unique_ptr< ParameterPool > | m_pool |
parameter pool (kind of pointer-to-implementation) More... | |
Two-dimensional pseudo-Voigt decay function in reciprocal space; corresponds to eta*Gauss + (1-eta)*Cauchy.
Definition at line 92 of file FTDecay2D.h.
FTDecayFunction2DVoigt::FTDecayFunction2DVoigt | ( | const std::vector< double > | P | ) |
Definition at line 116 of file FTDecay2D.cpp.
References INF.
Referenced by clone().
FTDecayFunction2DVoigt::FTDecayFunction2DVoigt | ( | double | decay_length_x, |
double | decay_length_y, | ||
double | gamma, | ||
double | eta | ||
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Definition at line 127 of file FTDecay2D.cpp.
References eta(), and IFTDecayFunction2D::gamma().
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inlinefinalvirtual |
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inherited |
transform back to a*, b* basis:
Calculates bounding values of reciprocal lattice coordinates that contain the centered rectangle with a corner defined by qX and qY.
Definition at line 39 of file FTDecay2D.cpp.
References IFTDecayFunction2D::transformToRecLatticeCoordinates().
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virtual |
Implements IFTDecayFunction2D.
Definition at line 133 of file FTDecay2D.cpp.
References FTDecayFunction2DVoigt(), IFTDecayFunction2D::m_decay_length_x, IFTDecayFunction2D::m_decay_length_y, m_eta, and IFTDecayFunction2D::m_gamma.
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inherited |
Returns copyNumber of child, which takes into account existence of children with same name.
Definition at line 94 of file INode.cpp.
References INode::getChildren(), IParametricComponent::getName(), and INode::parent().
Referenced by INode::displayName().
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virtualinherited |
Creates new parameter pool, with all local parameters and those of its children.
Reimplemented from IParametricComponent.
Definition at line 126 of file INode.cpp.
References NodeUtils::nodePath(), INode::parent(), and INode::progeny().
Referenced by ISimulation::runSimulation(), DepthProbeSimulation::validateParametrization(), OffSpecularSimulation::validateParametrization(), and SpecularSimulation::validateParametrization().
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inlineinherited |
get decay length in distribution's X-direction
Definition at line 34 of file FTDecay2D.h.
References IFTDecayFunction2D::m_decay_length_x.
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inlineinherited |
get decay length in distribution's Y-direction
Definition at line 36 of file FTDecay2D.h.
References IFTDecayFunction2D::m_decay_length_y.
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inherited |
Returns display name, composed from the name of node and it's copy number.
Definition at line 115 of file INode.cpp.
References INode::copyNumber(), IParametricComponent::getName(), and INode::m_parent.
Referenced by NodeUtils::nodePath().
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Definition at line 100 of file FTDecay2D.h.
References m_eta.
Referenced by FTDecayFunction2DVoigt().
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finalvirtual |
evaluate Fourier transformed decay function for q in X,Y coordinates
Implements IFTDecayFunction2D.
Definition at line 138 of file FTDecay2D.cpp.
References IFTDecayFunction2D::m_decay_length_x, IFTDecayFunction2D::m_decay_length_y, m_eta, and M_TWOPI.
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inlineinherited |
get angle between first lattice vector and X-axis of distribution (both in direct space)
Definition at line 38 of file FTDecay2D.h.
References IFTDecayFunction2D::m_gamma.
Referenced by FTDecayFunction2DCauchy::FTDecayFunction2DCauchy(), FTDecayFunction2DGauss::FTDecayFunction2DGauss(), and FTDecayFunction2DVoigt().
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virtualinherited |
Returns a vector of children.
Reimplemented in SampleProvider, IParticle, ParticleLayout, InterferenceFunctionFinite3DLattice, InterferenceFunctionFinite2DLattice, InterferenceFunction3DLattice, InterferenceFunction2DSuperLattice, InterferenceFunction2DParaCrystal, InterferenceFunction2DLattice, InterferenceFunction1DLattice, IDetector, Beam, ParticleDistribution, ParticleCoreShell, ParticleComposition, Particle, MesoCrystal, Crystal, MultiLayer, Layer, InterferenceFunctionRadialParaCrystal, LayerInterface, ConvolutionDetectorResolution, Instrument, and ISimulation.
Definition at line 63 of file INode.cpp.
Referenced by node_progeny::AllDescendantsOfType(), node_progeny::ChildNodesOfType(), ISampleNode::containedMaterials(), INode::copyNumber(), INode::progeny(), and NodeUtils::progenyPlus().
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Definition at line 70 of file IParametricComponent.h.
References IParametricComponent::m_name.
Referenced by Beam::Beam(), ConvolutionDetectorResolution::ConvolutionDetectorResolution(), IDetector::IDetector(), Instrument::Instrument(), IParametricComponent::IParametricComponent(), SampleBuilderNode::SampleBuilderNode(), Layer::clone(), INode::copyNumber(), IParametricComponent::createParameterTree(), IFormFactor::createSlicedFormFactor(), SampleToPython::defineInterferenceFunctions(), INode::displayName(), Beam::operator=(), SampleBuilderNode::operator=(), GUIObjectBuilder::populateInstrumentModel(), PyImportAssistant::populateModels(), GUIDomainSampleVisitor::populateSampleModel(), IParametricComponent::registerParameter(), IFormFactor::sliceFormFactor(), and GUIDomainSampleVisitor::visit().
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inlinevirtualinherited |
Action to be taken in inherited class when a parameter has changed.
Reimplemented in IProfileRipple, Lattice3D, InterferenceFunction3DLattice, InterferenceFunction2DLattice, FormFactorSphereLogNormalRadius, FormFactorSphereGaussianRadius, FormFactorGaussSphere, ISawtoothRipple, ICosineRipple, IProfileRectangularRipple, FormFactorTruncatedSpheroid, FormFactorTruncatedSphere, FormFactorTruncatedCube, FormFactorTetrahedron, FormFactorPyramid, FormFactorPrism6, FormFactorPrism3, FormFactorLongBoxLorentz, FormFactorLongBoxGauss, FormFactorIcosahedron, FormFactorHollowSphere, FormFactorHemiEllipsoid, FormFactorFullSpheroid, FormFactorFullSphere, FormFactorEllipsoidalCylinder, FormFactorDodecahedron, FormFactorCylinder, FormFactorCuboctahedron, FormFactorCone6, FormFactorCone, FormFactorCantellatedCube, FormFactorBox, FormFactorAnisoPyramid, and Lattice2D.
Definition at line 59 of file IParametricComponent.h.
Referenced by Lattice2D::onChange(), and IParametricComponent::registerParameter().
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inherited |
Returns parameter with given 'name'.
Definition at line 86 of file IParametricComponent.cpp.
References IParametricComponent::m_pool, and RealSpace::Particles::name().
Referenced by DepthProbeSimulation::initialize(), SpecularSimulation::initialize(), Lattice3D::initialize(), IParticle::registerAbundance(), ParticleLayout::registerParticleDensity(), IParticle::registerPosition(), Layer::registerThickness(), Lattice2D::setRotationEnabled(), and DistributionLogNormal::setUnits().
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inlineinherited |
Returns pointer to the parameter pool.
Definition at line 39 of file IParametricComponent.h.
References IParametricComponent::m_pool.
Referenced by INode::INode(), IParametricComponent::IParametricComponent(), pyfmt2::argumentList(), SampleBuilderNode::borrow_builder_parameters(), SampleBuilderNode::reset(), and IDistribution1D::setUnits().
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inherited |
Returns multiline string representing available parameters.
Definition at line 43 of file IParametricComponent.cpp.
References IParametricComponent::createParameterTree().
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inherited |
Definition at line 89 of file INode.cpp.
References INode::m_parent.
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Definition at line 84 of file INode.cpp.
References INode::m_parent.
Referenced by INode::copyNumber(), INode::createParameterTree(), ParticleDistribution::generateParticles(), NodeUtils::nodePath(), Lattice2D::onChange(), SampleProvider::setBuilder(), SampleProvider::setParent(), and SampleProvider::setSample().
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inherited |
Returns a vector of all descendants.
Definition at line 68 of file INode.cpp.
References INode::getChildren().
Referenced by INode::createParameterTree(), and ParticleDistribution::generateParticles().
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inherited |
Definition at line 57 of file INode.cpp.
References ASSERT, and INode::setParent().
Referenced by Beam::Beam(), Crystal::Crystal(), IDetector::IDetector(), Instrument::Instrument(), InterferenceFunction2DLattice::InterferenceFunction2DLattice(), InterferenceFunction2DParaCrystal::InterferenceFunction2DParaCrystal(), InterferenceFunction2DSuperLattice::InterferenceFunction2DSuperLattice(), InterferenceFunctionFinite2DLattice::InterferenceFunctionFinite2DLattice(), Particle::Particle(), ParticleDistribution::ParticleDistribution(), ParticleLayout::addAndRegisterAbstractParticle(), ParticleCoreShell::addAndRegisterCore(), MultiLayer::addAndRegisterInterface(), MultiLayer::addAndRegisterLayer(), ParticleCoreShell::addAndRegisterShell(), Layer::addLayout(), ParticleComposition::addParticlePointer(), ISimulation::initialize(), MesoCrystal::initialize(), Beam::operator=(), Instrument::operator=(), IParticle::rotate(), ParticleLayout::setAndRegisterInterferenceFunction(), ISimulation::setBackground(), InterferenceFunction1DLattice::setDecayFunction(), InterferenceFunction2DLattice::setDecayFunction(), Instrument::setDetector(), IDetector::setDetectorResolution(), Beam::setFootprintFactor(), Particle::setFormFactor(), InterferenceFunctionFinite3DLattice::setLattice(), InterferenceFunctionRadialParaCrystal::setProbabilityDistribution(), InterferenceFunction2DParaCrystal::setProbabilityDistributions(), ConvolutionDetectorResolution::setResolutionFunction(), IParticle::setRotation(), LayerInterface::setRoughness(), and InterferenceFunction2DSuperLattice::setSubstructureIFF().
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Definition at line 51 of file IParametricComponent.cpp.
References IParametricComponent::getName(), IParametricComponent::m_pool, RealSpace::Particles::name(), and IParametricComponent::onChange().
Referenced by BasicLattice2D::BasicLattice2D(), Beam::Beam(), CylindersInBABuilder::CylindersInBABuilder(), DetectionProperties::DetectionProperties(), HexagonalLattice2D::HexagonalLattice2D(), IInterferenceFunction::IInterferenceFunction(), INode::INode(), InterferenceFunction1DLattice::InterferenceFunction1DLattice(), InterferenceFunction2DParaCrystal::InterferenceFunction2DParaCrystal(), InterferenceFunctionHardDisk::InterferenceFunctionHardDisk(), InterferenceFunctionRadialParaCrystal::InterferenceFunctionRadialParaCrystal(), InterferenceFunctionTwin::InterferenceFunctionTwin(), Lattice2D::Lattice2D(), LayerRoughness::LayerRoughness(), MultiLayer::MultiLayer(), ParticleDistribution::ParticleDistribution(), PlainMultiLayerBySLDBuilder::PlainMultiLayerBySLDBuilder(), ResolutionFunction2DGaussian::ResolutionFunction2DGaussian(), ResonatorBuilder::ResonatorBuilder(), SquareLattice2D::SquareLattice2D(), TriangularRippleBuilder::TriangularRippleBuilder(), IParticle::registerAbundance(), ParticleLayout::registerParticleDensity(), Layer::registerThickness(), IParametricComponent::registerVector(), ParticleLayout::registerWeight(), and Lattice2D::setRotationEnabled().
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Definition at line 57 of file IParametricComponent.cpp.
References ModelView::Utils::base_name(), IParametricComponent::registerParameter(), RealParameter::setUnit(), IParametricComponent::XComponentName(), IParametricComponent::YComponentName(), and IParametricComponent::ZComponentName().
Referenced by Beam::Beam(), DetectionProperties::DetectionProperties(), InterferenceFunctionTwin::InterferenceFunctionTwin(), MultiLayer::MultiLayer(), Lattice3D::initialize(), and IParticle::registerPosition().
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Definition at line 91 of file IParametricComponent.cpp.
References IParametricComponent::m_pool, and RealSpace::Particles::name().
Referenced by IParticle::registerAbundance(), ParticleLayout::registerParticleDensity(), Layer::registerThickness(), IParametricComponent::removeVector(), and Lattice2D::setRotationEnabled().
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Definition at line 96 of file IParametricComponent.cpp.
References ModelView::Utils::base_name(), IParametricComponent::removeParameter(), IParametricComponent::XComponentName(), IParametricComponent::YComponentName(), and IParametricComponent::ZComponentName().
Referenced by IParticle::registerPosition().
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Definition at line 69 of file IParametricComponent.h.
References IParametricComponent::m_name, and RealSpace::Particles::name().
Referenced by BasicLattice2D::BasicLattice2D(), Beam::Beam(), ConvolutionDetectorResolution::ConvolutionDetectorResolution(), Crystal::Crystal(), DetectionProperties::DetectionProperties(), DistributionHandler::DistributionHandler(), FormFactorCoreShell::FormFactorCoreShell(), FormFactorCrystal::FormFactorCrystal(), FormFactorDecoratorMaterial::FormFactorDecoratorMaterial(), FormFactorDecoratorPositionFactor::FormFactorDecoratorPositionFactor(), FormFactorDecoratorRotation::FormFactorDecoratorRotation(), FormFactorWeighted::FormFactorWeighted(), HexagonalLattice2D::HexagonalLattice2D(), IDetector::IDetector(), INode::INode(), Instrument::Instrument(), InterferenceFunction1DLattice::InterferenceFunction1DLattice(), InterferenceFunction2DLattice::InterferenceFunction2DLattice(), InterferenceFunction2DParaCrystal::InterferenceFunction2DParaCrystal(), InterferenceFunction2DSuperLattice::InterferenceFunction2DSuperLattice(), InterferenceFunction3DLattice::InterferenceFunction3DLattice(), InterferenceFunctionFinite2DLattice::InterferenceFunctionFinite2DLattice(), InterferenceFunctionFinite3DLattice::InterferenceFunctionFinite3DLattice(), InterferenceFunctionHardDisk::InterferenceFunctionHardDisk(), InterferenceFunctionNone::InterferenceFunctionNone(), InterferenceFunctionRadialParaCrystal::InterferenceFunctionRadialParaCrystal(), InterferenceFunctionTwin::InterferenceFunctionTwin(), ISampleBuilder::ISampleBuilder(), IsGISAXSDetector::IsGISAXSDetector(), Lattice3D::Lattice3D(), Layer::Layer(), LayerInterface::LayerInterface(), LayerRoughness::LayerRoughness(), MultiLayer::MultiLayer(), ParticleCoreShell::ParticleCoreShell(), ParticleDistribution::ParticleDistribution(), ParticleLayout::ParticleLayout(), RectangularDetector::RectangularDetector(), ResolutionFunction2DGaussian::ResolutionFunction2DGaussian(), SampleBuilderNode::SampleBuilderNode(), SphericalDetector::SphericalDetector(), SquareLattice2D::SquareLattice2D(), Layer::clone(), LayersWithAbsorptionBuilder::createSampleByIndex(), Basic2DParaCrystalBuilder::createSampleByIndex(), ParticleInVacuumBuilder::createSampleByIndex(), SimpleMagneticRotationBuilder::createSampleByIndex(), DepthProbeSimulation::initialize(), GISASSimulation::initialize(), OffSpecularSimulation::initialize(), SpecularSimulation::initialize(), SpecularDetector1D::initialize(), MesoCrystal::initialize(), Particle::initialize(), ParticleComposition::initialize(), Beam::operator=(), SampleBuilderNode::operator=(), SampleBuilderNode::reset(), and SampleBuilderNode::setSBN().
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Definition at line 65 of file IParametricComponent.cpp.
References IParametricComponent::createParameterTree(), IParametricComponent::m_pool, RealSpace::Particles::name(), and ParameterPool::setMatchedParametersValue().
Referenced by AsymRippleBuilder::buildSample(), and IParametricComponent::setVectorValue().
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virtualinherited |
Reimplemented in SampleProvider.
Definition at line 79 of file INode.cpp.
References INode::m_parent.
Referenced by INode::registerChild(), SampleProvider::setBuilder(), and SampleProvider::setParent().
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Definition at line 78 of file IParametricComponent.cpp.
References ModelView::Utils::base_name(), IParametricComponent::setParameterValue(), BasicVector3D< T >::x(), IParametricComponent::XComponentName(), BasicVector3D< T >::y(), IParametricComponent::YComponentName(), BasicVector3D< T >::z(), and IParametricComponent::ZComponentName().
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inlinevirtualinherited |
Used for Python overriding of clone (see swig/tweaks.py)
Definition at line 34 of file ICloneable.h.
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privateinherited |
transform reciprocal coordinate system of this decay function to the reciprocal lattice system
Definition at line 49 of file FTDecay2D.cpp.
References IFTDecayFunction2D::m_gamma, and M_TWOPI.
Referenced by IFTDecayFunction2D::boundingReciprocalLatticeCoordinates().
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virtualinherited |
Returns multiline string representing tree structure below the node.
Definition at line 52 of file INode.cpp.
References NodeUtils::nodeToString().
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Definition at line 103 of file IParametricComponent.cpp.
References ModelView::Utils::base_name().
Referenced by Lattice3D::initialize(), IParticle::registerPosition(), IParametricComponent::registerVector(), IParametricComponent::removeVector(), IParametricComponent::setVectorValue(), and VectorParameterTranslator::translate().
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Definition at line 108 of file IParametricComponent.cpp.
References ModelView::Utils::base_name().
Referenced by IParametricComponent::registerVector(), IParametricComponent::removeVector(), IParametricComponent::setVectorValue(), and VectorParameterTranslator::translate().
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Definition at line 113 of file IParametricComponent.cpp.
References ModelView::Utils::base_name().
Referenced by IParametricComponent::registerVector(), IParametricComponent::removeVector(), IParametricComponent::setVectorValue(), and VectorParameterTranslator::translate().
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protectedinherited |
Definition at line 48 of file FTDecay2D.h.
Referenced by FTDecayFunction2DCauchy::clone(), FTDecayFunction2DGauss::clone(), clone(), IFTDecayFunction2D::decayLengthX(), FTDecayFunction2DCauchy::evaluate(), FTDecayFunction2DGauss::evaluate(), and evaluate().
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protectedinherited |
Definition at line 49 of file FTDecay2D.h.
Referenced by FTDecayFunction2DCauchy::clone(), FTDecayFunction2DGauss::clone(), clone(), IFTDecayFunction2D::decayLengthY(), FTDecayFunction2DCauchy::evaluate(), FTDecayFunction2DGauss::evaluate(), and evaluate().
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Definition at line 103 of file FTDecay2D.h.
Referenced by clone(), eta(), and evaluate().
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Definition at line 50 of file FTDecay2D.h.
Referenced by FTDecayFunction2DCauchy::clone(), FTDecayFunction2DGauss::clone(), clone(), IFTDecayFunction2D::gamma(), and IFTDecayFunction2D::transformToRecLatticeCoordinates().
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Definition at line 73 of file IParametricComponent.h.
Referenced by IParametricComponent::getName(), and IParametricComponent::setName().
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protectedinherited |
Definition at line 88 of file INode.h.
Referenced by INode::INode().
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protectedinherited |
Definition at line 89 of file INode.h.
Referenced by INode::INode(), and IFootprintFactor::setWidthRatio().
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privateinherited |
Definition at line 83 of file INode.h.
Referenced by INode::displayName(), INode::parent(), and INode::setParent().
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privateinherited |
parameter pool (kind of pointer-to-implementation)
Definition at line 74 of file IParametricComponent.h.
Referenced by IParametricComponent::createParameterTree(), IParametricComponent::parameter(), IParametricComponent::parameterPool(), IParametricComponent::registerParameter(), IParametricComponent::removeParameter(), and IParametricComponent::setParameterValue().